Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm20915-201ENSMUST00000191575 663 ntBASIC1.18□□□□□ -2.22
HttP42859 Gm44962-201ENSMUST00000206460 279 ntBASIC1.18□□□□□ -2.22
HttP42859 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HttP42859 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
HttP42859 Gm44446-201ENSMUST00000204864 255 ntBASIC1.18□□□□□ -2.22
HttP42859 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
HttP42859 Mir27b-201ENSMUST00000083541 73 ntBASIC1.18□□□□□ -2.22
HttP42859 Gm22353-201ENSMUST00000083918 136 ntBASIC1.18□□□□□ -2.22
HttP42859 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.17□□□□□ -2.22
HttP42859 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
HttP42859 Gm25220-201ENSMUST00000157546 95 ntBASIC1.17□□□□□ -2.22
HttP42859 Gm34015-201ENSMUST00000194908 451 ntBASIC1.17□□□□□ -2.22
HttP42859 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.17□□□□□ -2.22
HttP42859 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC1.17□□□□□ -2.22
HttP42859 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
HttP42859 CT025525.1-201ENSMUST00000226325 1054 ntBASIC1.17□□□□□ -2.22
HttP42859 Gm14736-201ENSMUST00000121470 336 ntBASIC1.17□□□□□ -2.22
HttP42859 Gm23385-201ENSMUST00000158592 295 ntBASIC1.17□□□□□ -2.22
HttP42859 Mir22-201ENSMUST00000083595 95 ntBASIC1.17□□□□□ -2.22
HttP42859 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
HttP42859 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HttP42859 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HttP42859 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.16□□□□□ -2.22
HttP42859 Mir6383-201ENSMUST00000184545 116 ntBASIC1.16□□□□□ -2.22
HttP42859 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
HttP42859 Gm24047-201ENSMUST00000102405 104 ntBASIC1.16□□□□□ -2.22
HttP42859 Gm28802-201ENSMUST00000188624 944 ntBASIC1.16□□□□□ -2.22
HttP42859 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.16□□□□□ -2.22
HttP42859 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
HttP42859 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.16□□□□□ -2.22
HttP42859 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
HttP42859 Gm12304-201ENSMUST00000120312 385 ntBASIC1.15□□□□□ -2.22
HttP42859 Gm25108-201ENSMUST00000122473 78 ntBASIC1.15□□□□□ -2.22
HttP42859 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HttP42859 Gm21959-201ENSMUST00000178439 452 ntBASIC1.15□□□□□ -2.22
HttP42859 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
HttP42859 Mir6351-201ENSMUST00000183826 99 ntBASIC1.15□□□□□ -2.22
HttP42859 Gm27698-201ENSMUST00000184060 249 ntBASIC1.15□□□□□ -2.22
HttP42859 Gm38044-201ENSMUST00000192964 487 ntBASIC1.15□□□□□ -2.22
HttP42859 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.15□□□□□ -2.22
HttP42859 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
HttP42859 Gm25806-201ENSMUST00000122782 122 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm24770-201ENSMUST00000158505 92 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm18953-201ENSMUST00000175694 300 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm8041-201ENSMUST00000199755 616 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm25079-201ENSMUST00000082529 203 ntBASIC1.15□□□□□ -2.23
HttP42859 Mir423-201ENSMUST00000083584 109 ntBASIC1.15□□□□□ -2.23
HttP42859 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HttP42859 Gm15108-201ENSMUST00000116160 803 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm13419-201ENSMUST00000121711 271 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm15111-201ENSMUST00000122142 878 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm45522-201ENSMUST00000210784 166 ntBASIC1.15□□□□□ -2.23
HttP42859 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC1.15□□□□□ -2.23
HttP42859 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.15□□□□□ -2.23
HttP42859 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.14□□□□□ -2.23
HttP42859 Gm22853-201ENSMUST00000174974 131 ntBASIC1.14□□□□□ -2.23
HttP42859 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
HttP42859 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.14□□□□□ -2.23
HttP42859 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
HttP42859 Gm7869-201ENSMUST00000121457 1322 ntBASIC1.14□□□□□ -2.23
HttP42859 Gm9009-201ENSMUST00000117321 326 ntBASIC1.14□□□□□ -2.23
HttP42859 Gm37997-201ENSMUST00000193515 267 ntBASIC1.14□□□□□ -2.23
HttP42859 Gm17990-201ENSMUST00000211728 553 ntBASIC1.14□□□□□ -2.23
HttP42859 Gm13614-201ENSMUST00000117306 503 ntBASIC1.13□□□□□ -2.23
HttP42859 Gm44989-201ENSMUST00000204749 217 ntBASIC1.13□□□□□ -2.23
HttP42859 Gm23528-201ENSMUST00000104571 132 ntBASIC1.13□□□□□ -2.23
HttP42859 Gm15659-201ENSMUST00000118881 341 ntBASIC1.13□□□□□ -2.23
HttP42859 Samd15-201ENSMUST00000169669 1194 ntBASIC1.13□□□□□ -2.23
HttP42859 Hmga1b-202ENSMUST00000178955 120 ntBASIC1.13□□□□□ -2.23
HttP42859 Mir6389-201ENSMUST00000183661 102 ntBASIC1.13□□□□□ -2.23
HttP42859 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.13□□□□□ -2.23
HttP42859 AC073947.1-201ENSMUST00000216991 649 ntBASIC1.13□□□□□ -2.23
HttP42859 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC1.13□□□□□ -2.23
HttP42859 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HttP42859 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HttP42859 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
HttP42859 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HttP42859 Gm13366-201ENSMUST00000122198 970 ntBASIC1.12□□□□□ -2.23
HttP42859 AC158803.1-201ENSMUST00000219495 316 ntBASIC1.12□□□□□ -2.23
HttP42859 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HttP42859 Gm3027-201ENSMUST00000167579 451 ntBASIC1.12□□□□□ -2.23
HttP42859 Gm28862-201ENSMUST00000188246 163 ntBASIC1.12□□□□□ -2.23
HttP42859 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
HttP42859 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HttP42859 Snord14a-201ENSMUST00000082807 87 ntBASIC1.12□□□□□ -2.23
HttP42859 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
HttP42859 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HttP42859 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HttP42859 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC1.11□□□□□ -2.23
HttP42859 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
HttP42859 Gm15951-201ENSMUST00000118377 400 ntBASIC1.11□□□□□ -2.23
HttP42859 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
HttP42859 Gm25339-201ENSMUST00000157458 232 ntBASIC1.11□□□□□ -2.23
HttP42859 Gm22386-201ENSMUST00000158192 129 ntBASIC1.11□□□□□ -2.23
HttP42859 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
HttP42859 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HttP42859 Gm10088-201ENSMUST00000074116 423 ntBASIC1.11□□□□□ -2.23
HttP42859 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
HttP42859 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms