Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm26433-201ENSMUST00000180227 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm22128-201ENSMUST00000180346 94 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm28283-201ENSMUST00000185509 178 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm37743-201ENSMUST00000194645 376 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm35212-201ENSMUST00000196672 606 ntBASIC3.3□□□□□ -1.88
Traf1P39428 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Traf1P39428 Gm34314-201ENSMUST00000203622 367 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Traf1P39428 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.3□□□□□ -1.88
Traf1P39428 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gm25202-201ENSMUST00000082838 191 ntBASIC3.3□□□□□ -1.88
Traf1P39428 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Traf1P39428 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Traf1P39428 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Traf1P39428 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm14982-201ENSMUST00000121102 442 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
Traf1P39428 Gm25945-201ENSMUST00000122484 135 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm23325-201ENSMUST00000157422 129 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm23025-201ENSMUST00000158769 111 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm24713-201ENSMUST00000178850 107 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm21893-201ENSMUST00000179119 397 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm25448-201ENSMUST00000180065 107 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC3.29□□□□□ -1.88
Traf1P39428 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Traf1P39428 Gm43991-201ENSMUST00000203751 274 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.29□□□□□ -1.88
Traf1P39428 Gm45387-201ENSMUST00000209792 632 ntBASIC3.29□□□□□ -1.88
Traf1P39428 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm7422-201ENSMUST00000220115 640 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.29□□□□□ -1.88
Traf1P39428 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Traf1P39428 Mir208a-201ENSMUST00000083498 83 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Traf1P39428 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.29□□□□□ -1.88
Traf1P39428 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Traf1P39428 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Traf1P39428 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Traf1P39428 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.28□□□□□ -1.88
Traf1P39428 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Traf1P39428 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Traf1P39428 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Traf1P39428 Gm14448-201ENSMUST00000116383 210 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm26473-201ENSMUST00000116763 127 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm11352-201ENSMUST00000119264 517 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm12793-201ENSMUST00000119268 292 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm23704-201ENSMUST00000158844 340 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm8338-201ENSMUST00000163928 363 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Traf1P39428 Gm26585-201ENSMUST00000180890 630 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm1833-201ENSMUST00000191608 682 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.28□□□□□ -1.88
Traf1P39428 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.28□□□□□ -1.88
Traf1P39428 Gm44990-201ENSMUST00000203922 217 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm44526-201ENSMUST00000204664 121 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.28□□□□□ -1.88
Traf1P39428 AC138667.2-201ENSMUST00000224880 598 ntBASIC3.28□□□□□ -1.88
Traf1P39428 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Traf1P39428 Gm10025-201ENSMUST00000079568 372 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Gm22061-201ENSMUST00000082557 107 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Traf1P39428 Gm23741-201ENSMUST00000097237 171 ntBASIC3.28□□□□□ -1.88
Traf1P39428 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Traf1P39428 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Traf1P39428 AC124561.2-201ENSMUST00000226657 1973 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
Traf1P39428 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
Traf1P39428 Gm13343-201ENSMUST00000116474 105 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm22091-201ENSMUST00000116908 127 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm12155-201ENSMUST00000121267 160 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.27□□□□□ -1.89
Traf1P39428 Gm22390-201ENSMUST00000157588 325 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm24879-201ENSMUST00000158386 143 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Traf1P39428 Gm17166-201ENSMUST00000172006 431 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Traf1P39428 Gm24757-201ENSMUST00000176987 371 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm27582-201ENSMUST00000184084 126 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Mir7062-201ENSMUST00000185038 66 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm44476-201ENSMUST00000196225 91 ntBASIC3.27□□□□□ -1.89
Traf1P39428 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm44324-201ENSMUST00000198517 135 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.27□□□□□ -1.89
Traf1P39428 Gm44609-201ENSMUST00000207157 460 ntBASIC3.27□□□□□ -1.89
Traf1P39428 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.27□□□□□ -1.89
Traf1P39428 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.27□□□□□ -1.89
Traf1P39428 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Traf1P39428 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Gm23848-201ENSMUST00000083826 106 ntBASIC3.27□□□□□ -1.89
Traf1P39428 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Traf1P39428 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms