Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm26271-201ENSMUST00000158349 104 ntBASIC2.34□□□□□ -2.03
P20040 Gm25365-201ENSMUST00000158852 121 ntBASIC2.34□□□□□ -2.03
P20040 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.34□□□□□ -2.03
P20040 Zfp950-206ENSMUST00000178819 171 ntBASIC2.34□□□□□ -2.03
P20040 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
P20040 Gm24137-201ENSMUST00000180055 79 ntBASIC2.34□□□□□ -2.03
P20040 Gm22391-201ENSMUST00000180356 79 ntBASIC2.34□□□□□ -2.03
P20040 Gm27379-201ENSMUST00000183730 123 ntBASIC2.34□□□□□ -2.03
P20040 Gm6801-201ENSMUST00000190697 339 ntBASIC2.34□□□□□ -2.03
P20040 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.34□□□□□ -2.03
P20040 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.34□□□□□ -2.03
P20040 Gm45049-201ENSMUST00000207586 591 ntBASIC2.34□□□□□ -2.03
P20040 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.34□□□□□ -2.03
P20040 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.34□□□□□ -2.03
P20040 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.34□□□□□ -2.03
P20040 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.34□□□□□ -2.03
P20040 Gm10025-201ENSMUST00000079568 372 ntBASIC2.34□□□□□ -2.03
P20040 Gm26458-201ENSMUST00000082832 128 ntBASIC2.34□□□□□ -2.03
P20040 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.34□□□□□ -2.04
P20040 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
P20040 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
P20040 Gm23128-201ENSMUST00000104257 132 ntBASIC2.33□□□□□ -2.04
P20040 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.33□□□□□ -2.04
P20040 Gm7327-201ENSMUST00000120925 652 ntBASIC2.33□□□□□ -2.04
P20040 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.33□□□□□ -2.04
P20040 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
P20040 Gm24240-201ENSMUST00000157785 135 ntBASIC2.33□□□□□ -2.04
P20040 Mir3964-201ENSMUST00000174898 74 ntBASIC2.33□□□□□ -2.04
P20040 Gm24082-201ENSMUST00000175175 83 ntBASIC2.33□□□□□ -2.04
P20040 Gm24264-201ENSMUST00000179835 94 ntBASIC2.33□□□□□ -2.04
P20040 Mir6916-201ENSMUST00000184514 63 ntBASIC2.33□□□□□ -2.04
P20040 Gm29658-201ENSMUST00000185404 230 ntBASIC2.33□□□□□ -2.04
P20040 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.33□□□□□ -2.04
P20040 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.33□□□□□ -2.04
P20040 Gm29597-201ENSMUST00000188035 308 ntBASIC2.33□□□□□ -2.04
P20040 Gm37743-201ENSMUST00000194645 376 ntBASIC2.33□□□□□ -2.04
P20040 Gm23128-202ENSMUST00000196578 133 ntBASIC2.33□□□□□ -2.04
P20040 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.33□□□□□ -2.04
P20040 Gm43901-201ENSMUST00000203247 453 ntBASIC2.33□□□□□ -2.04
P20040 Gm44526-201ENSMUST00000204664 121 ntBASIC2.33□□□□□ -2.04
P20040 Gm19252-201ENSMUST00000204705 305 ntBASIC2.33□□□□□ -2.04
P20040 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.33□□□□□ -2.04
P20040 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.33□□□□□ -2.04
P20040 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.33□□□□□ -2.04
P20040 AC164597.2-201ENSMUST00000226738 603 ntBASIC2.33□□□□□ -2.04
P20040 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
P20040 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
P20040 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
P20040 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
P20040 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
P20040 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
P20040 Gm25376-201ENSMUST00000104340 133 ntBASIC2.32□□□□□ -2.04
P20040 Gm25563-201ENSMUST00000104603 74 ntBASIC2.32□□□□□ -2.04
P20040 Gm13510-201ENSMUST00000118659 429 ntBASIC2.32□□□□□ -2.04
P20040 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.32□□□□□ -2.04
P20040 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.32□□□□□ -2.04
P20040 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.32□□□□□ -2.04
P20040 Gm22131-201ENSMUST00000178415 94 ntBASIC2.32□□□□□ -2.04
P20040 Gm24897-201ENSMUST00000179033 107 ntBASIC2.32□□□□□ -2.04
P20040 Gm27532-201ENSMUST00000183726 113 ntBASIC2.32□□□□□ -2.04
P20040 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.32□□□□□ -2.04
P20040 Gm7871-201ENSMUST00000195346 618 ntBASIC2.32□□□□□ -2.04
P20040 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.32□□□□□ -2.04
P20040 Gm18341-201ENSMUST00000197538 622 ntBASIC2.32□□□□□ -2.04
P20040 Gm44324-201ENSMUST00000198517 135 ntBASIC2.32□□□□□ -2.04
P20040 Gm45387-201ENSMUST00000209792 632 ntBASIC2.32□□□□□ -2.04
P20040 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC2.32□□□□□ -2.04
P20040 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
P20040 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.32□□□□□ -2.04
P20040 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.32□□□□□ -2.04
P20040 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
P20040 Gm24817-201ENSMUST00000093672 105 ntBASIC2.32□□□□□ -2.04
P20040 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
P20040 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
P20040 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.31□□□□□ -2.04
P20040 Gm25088-201ENSMUST00000101803 79 ntBASIC2.31□□□□□ -2.04
P20040 Gm14428-201ENSMUST00000120408 822 ntBASIC2.31□□□□□ -2.04
P20040 Gm12617-201ENSMUST00000121268 381 ntBASIC2.31□□□□□ -2.04
P20040 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.31□□□□□ -2.04
P20040 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.31□□□□□ -2.04
P20040 Gm22818-201ENSMUST00000157446 104 ntBASIC2.31□□□□□ -2.04
P20040 Gm22817-201ENSMUST00000157448 356 ntBASIC2.31□□□□□ -2.04
P20040 Gm24291-201ENSMUST00000157633 162 ntBASIC2.31□□□□□ -2.04
P20040 Gm16588-201ENSMUST00000162889 355 ntBASIC2.31□□□□□ -2.04
P20040 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC2.31□□□□□ -2.04
P20040 Gm25476-201ENSMUST00000175125 185 ntBASIC2.31□□□□□ -2.04
P20040 Gm20718-201ENSMUST00000176058 259 ntBASIC2.31□□□□□ -2.04
P20040 Gm4076-201ENSMUST00000179230 965 ntBASIC2.31□□□□□ -2.04
P20040 Gm21894-201ENSMUST00000179631 546 ntBASIC2.31□□□□□ -2.04
P20040 Gm25528-201ENSMUST00000180264 132 ntBASIC2.31□□□□□ -2.04
P20040 Gm5224-201ENSMUST00000183060 350 ntBASIC2.31□□□□□ -2.04
P20040 Gm27786-201ENSMUST00000184337 70 ntBASIC2.31□□□□□ -2.04
P20040 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
P20040 Gm43171-201ENSMUST00000199882 291 ntBASIC2.31□□□□□ -2.04
P20040 Gm43004-201ENSMUST00000201872 703 ntBASIC2.31□□□□□ -2.04
P20040 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.31□□□□□ -2.04
P20040 Gm43955-201ENSMUST00000204332 142 ntBASIC2.31□□□□□ -2.04
P20040 Gm44961-201ENSMUST00000207450 196 ntBASIC2.31□□□□□ -2.04
P20040 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.31□□□□□ -2.04
P20040 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms