Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm28453-203ENSMUST00000187041 189 ntBASIC4.64□□□□□ -1.67
RaraP11416 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.64□□□□□ -1.67
RaraP11416 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RaraP11416 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
RaraP11416 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.64□□□□□ -1.67
RaraP11416 Gm22826-201ENSMUST00000083774 165 ntBASIC4.64□□□□□ -1.67
RaraP11416 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.64□□□□□ -1.67
RaraP11416 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.64□□□□□ -1.67
RaraP11416 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
RaraP11416 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
RaraP11416 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RaraP11416 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RaraP11416 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RaraP11416 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
RaraP11416 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RaraP11416 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RaraP11416 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RaraP11416 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RaraP11416 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.63□□□□□ -1.67
RaraP11416 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
RaraP11416 Gm22936-201ENSMUST00000103955 126 ntBASIC4.63□□□□□ -1.67
RaraP11416 Gm23184-201ENSMUST00000122594 131 ntBASIC4.63□□□□□ -1.67
RaraP11416 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
RaraP11416 Gm28020-201ENSMUST00000157739 67 ntBASIC4.63□□□□□ -1.67
RaraP11416 Gm23277-201ENSMUST00000157914 136 ntBASIC4.63□□□□□ -1.67
RaraP11416 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC4.63□□□□□ -1.67
RaraP11416 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC4.63□□□□□ -1.67
RaraP11416 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.63□□□□□ -1.67
RaraP11416 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.63□□□□□ -1.67
RaraP11416 Gm25411-201ENSMUST00000083760 151 ntBASIC4.63□□□□□ -1.67
RaraP11416 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.63□□□□□ -1.67
RaraP11416 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.63□□□□□ -1.67
RaraP11416 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
RaraP11416 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
RaraP11416 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RaraP11416 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.63□□□□□ -1.67
RaraP11416 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
RaraP11416 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RaraP11416 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RaraP11416 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.62□□□□□ -1.67
RaraP11416 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
RaraP11416 Gm23608-201ENSMUST00000104545 128 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm6897-201ENSMUST00000117714 138 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm14758-201ENSMUST00000119104 138 ntBASIC4.62□□□□□ -1.67
RaraP11416 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.62□□□□□ -1.67
RaraP11416 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RaraP11416 Gm25720-201ENSMUST00000157503 105 ntBASIC4.62□□□□□ -1.67
RaraP11416 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC4.62□□□□□ -1.67
RaraP11416 Gm22177-201ENSMUST00000175002 158 ntBASIC4.62□□□□□ -1.67
RaraP11416 Aste1-207ENSMUST00000176940 1151 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
RaraP11416 Gm24167-201ENSMUST00000177733 124 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm24028-201ENSMUST00000178991 124 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm19503-201ENSMUST00000187109 241 ntBASIC4.62□□□□□ -1.67
RaraP11416 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.62□□□□□ -1.67
RaraP11416 Gm37162-201ENSMUST00000191708 551 ntBASIC4.62□□□□□ -1.67
RaraP11416 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
RaraP11416 Gm7093-201ENSMUST00000223004 581 ntBASIC4.62□□□□□ -1.67
RaraP11416 AC134860.6-201ENSMUST00000226038 285 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm22704-201ENSMUST00000083027 137 ntBASIC4.62□□□□□ -1.67
RaraP11416 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.62□□□□□ -1.67
RaraP11416 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.62□□□□□ -1.67
RaraP11416 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RaraP11416 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.62□□□□□ -1.67
RaraP11416 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
RaraP11416 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.61□□□□□ -1.67
RaraP11416 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
RaraP11416 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RaraP11416 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.61□□□□□ -1.67
RaraP11416 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.61□□□□□ -1.67
RaraP11416 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RaraP11416 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RaraP11416 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
RaraP11416 Gm26019-201ENSMUST00000104407 119 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm13541-201ENSMUST00000119519 283 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm5937-201ENSMUST00000119715 643 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm2182-201ENSMUST00000145243 663 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm23513-201ENSMUST00000158181 133 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm22611-201ENSMUST00000158288 150 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm25605-201ENSMUST00000158364 124 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm23209-201ENSMUST00000158667 110 ntBASIC4.61□□□□□ -1.67
RaraP11416 Mir5098-201ENSMUST00000175320 82 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm36259-201ENSMUST00000197340 392 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.61□□□□□ -1.67
RaraP11416 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
RaraP11416 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.61□□□□□ -1.67
RaraP11416 AC155712.1-201ENSMUST00000219704 160 ntBASIC4.61□□□□□ -1.67
RaraP11416 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.61□□□□□ -1.67
RaraP11416 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm24611-201ENSMUST00000083272 107 ntBASIC4.61□□□□□ -1.67
RaraP11416 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
RaraP11416 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms