Protein–RNA interactions for Protein: P10628

Hoxd4, Homeobox protein Hox-D4, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd4P10628 Gm34091-201ENSMUST00000200875 604 ntBASIC3.71□□□□□ -1.82
Hoxd4P10628 Gm44720-201ENSMUST00000206076 260 ntBASIC3.71□□□□□ -1.82
Hoxd4P10628 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.71□□□□□ -1.82
Hoxd4P10628 Gm24031-201ENSMUST00000083930 131 ntBASIC3.71□□□□□ -1.82
Hoxd4P10628 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Hoxd4P10628 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Hoxd4P10628 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.71□□□□□ -1.82
Hoxd4P10628 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.71□□□□□ -1.82
Hoxd4P10628 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd4P10628 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd4P10628 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm25938-201ENSMUST00000104139 166 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm15195-201ENSMUST00000118775 263 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm13155-201ENSMUST00000119277 646 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm14656-201ENSMUST00000120342 502 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm8178-201ENSMUST00000121570 646 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm22026-201ENSMUST00000122735 281 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm25913-201ENSMUST00000157617 135 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm28020-201ENSMUST00000157739 67 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm25883-201ENSMUST00000157781 271 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm24348-201ENSMUST00000158710 130 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm17052-201ENSMUST00000165496 289 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm22243-201ENSMUST00000178754 120 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Mir7074-201ENSMUST00000183884 63 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Mir6346-201ENSMUST00000183982 81 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm27690-201ENSMUST00000184596 126 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm27564-201ENSMUST00000185196 96 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm5329-201ENSMUST00000186898 463 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.7□□□□□ -1.82
Hoxd4P10628 Mir7661-201ENSMUST00000197023 61 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm43407-201ENSMUST00000199816 317 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm43600-201ENSMUST00000202134 223 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.7□□□□□ -1.82
Hoxd4P10628 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.7□□□□□ -1.82
Hoxd4P10628 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm23875-201ENSMUST00000083711 318 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Hoxd4P10628 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd4P10628 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Hoxd4P10628 AC121997.2-203ENSMUST00000228613 4192 ntBASIC3.7□□□□□ -1.82
Hoxd4P10628 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm24423-201ENSMUST00000101982 106 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm14688-201ENSMUST00000119169 303 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm23959-201ENSMUST00000157208 324 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm22156-201ENSMUST00000158409 141 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm27834-201ENSMUST00000183427 125 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm27465-201ENSMUST00000184290 91 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Mir6899-201ENSMUST00000184798 64 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Mir6975-201ENSMUST00000184879 61 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm29031-201ENSMUST00000185316 614 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm29000-201ENSMUST00000185444 614 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28339-201ENSMUST00000185845 696 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28204-201ENSMUST00000185934 614 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm29574-201ENSMUST00000186226 696 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28290-201ENSMUST00000186505 614 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28828-201ENSMUST00000186601 696 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28057-201ENSMUST00000186603 615 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28161-201ENSMUST00000186669 614 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28896-201ENSMUST00000188609 696 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28749-209ENSMUST00000189599 614 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm28159-201ENSMUST00000190296 696 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm37997-201ENSMUST00000193515 267 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm33163-201ENSMUST00000194504 614 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm38107-201ENSMUST00000194873 696 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm44076-201ENSMUST00000203072 520 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm44533-201ENSMUST00000207782 268 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm26446-201ENSMUST00000082455 103 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm23677-201ENSMUST00000083156 104 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm25755-201ENSMUST00000083396 107 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.69□□□□□ -1.82
Hoxd4P10628 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd4P10628 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd4P10628 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Hoxd4P10628 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Hoxd4P10628 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Hoxd4P10628 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.68□□□□□ -1.82
Hoxd4P10628 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hoxd4P10628 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms