Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm7837-201ENSMUST00000190873 412 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm44392-201ENSMUST00000196758 115 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Mir7232-201ENSMUST00000197929 74 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm43550-201ENSMUST00000200597 303 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm6369-201ENSMUST00000069626 412 ntBASIC2.54□□□□□ -2
Chmp6P0C0A3 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.54□□□□□ -2
Chmp6P0C0A3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.53□□□□□ -2
Chmp6P0C0A3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm15113-201ENSMUST00000119280 836 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm15223-201ENSMUST00000120989 826 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm23033-201ENSMUST00000157996 134 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm24210-201ENSMUST00000158263 133 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.53□□□□□ -2
Chmp6P0C0A3 Mir3066-201ENSMUST00000175296 83 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm24813-201ENSMUST00000175310 84 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm23963-201ENSMUST00000179603 77 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm28755-201ENSMUST00000185773 199 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm44391-201ENSMUST00000198490 93 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm34701-202ENSMUST00000204685 360 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm44478-201ENSMUST00000204875 114 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.53□□□□□ -2
Chmp6P0C0A3 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm6796-201ENSMUST00000211919 243 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.53□□□□□ -2
Chmp6P0C0A3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.53□□□□□ -2
Chmp6P0C0A3 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.53□□□□□ -2
Chmp6P0C0A3 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC2.53□□□□□ -2
Chmp6P0C0A3 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Chmp6P0C0A3 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.53□□□□□ -2.01
Chmp6P0C0A3 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.53□□□□□ -2.01
Chmp6P0C0A3 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm24126-201ENSMUST00000104111 106 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm23803-201ENSMUST00000104610 132 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Mir467h-201ENSMUST00000116759 121 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm26275-201ENSMUST00000157101 268 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm8580-201ENSMUST00000160295 464 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm17063-201ENSMUST00000168135 456 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm29600-201ENSMUST00000188687 377 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm21489-201ENSMUST00000189668 818 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm8041-201ENSMUST00000199755 616 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm43600-201ENSMUST00000202134 223 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm44295-201ENSMUST00000203805 437 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Gm23650-201ENSMUST00000083355 70 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Mir127-201ENSMUST00000093568 70 ntBASIC2.52□□□□□ -2.01
Chmp6P0C0A3 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm25529-201ENSMUST00000104850 92 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm14594-201ENSMUST00000118052 537 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm14590-201ENSMUST00000118934 537 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm15112-201ENSMUST00000120152 860 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm5287-201ENSMUST00000120666 598 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm12443-201ENSMUST00000122308 323 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm23867-201ENSMUST00000122649 274 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm25621-201ENSMUST00000157223 114 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm24100-201ENSMUST00000178592 79 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm14596-201ENSMUST00000180268 537 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm14595-201ENSMUST00000180335 537 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm28412-201ENSMUST00000187243 177 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm29263-201ENSMUST00000188718 463 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm28384-201ENSMUST00000189079 463 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm19224-201ENSMUST00000190477 793 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm43901-201ENSMUST00000203247 453 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm19252-201ENSMUST00000204705 305 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.51□□□□□ -2.01
Chmp6P0C0A3 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Mir423-201ENSMUST00000083584 109 ntBASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
Chmp6P0C0A3 Gm14657-201ENSMUST00000117461 302 ntBASIC2.5□□□□□ -2.01
Chmp6P0C0A3 Gm11556-201ENSMUST00000120751 288 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms