Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.03□□□□□ -2.08
CopeO89079 Gm28951-201ENSMUST00000190742 313 ntBASIC2.03□□□□□ -2.08
CopeO89079 Gm32033-201ENSMUST00000193483 339 ntBASIC2.03□□□□□ -2.08
CopeO89079 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.03□□□□□ -2.08
CopeO89079 Gm19457-201ENSMUST00000200995 448 ntBASIC2.03□□□□□ -2.08
CopeO89079 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CopeO89079 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CopeO89079 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.03□□□□□ -2.08
CopeO89079 Gm18338-201ENSMUST00000222381 560 ntBASIC2.03□□□□□ -2.08
CopeO89079 AC183096.2-201ENSMUST00000228733 457 ntBASIC2.03□□□□□ -2.08
CopeO89079 Gm22866-201ENSMUST00000083947 177 ntBASIC2.03□□□□□ -2.08
CopeO89079 Gm24817-201ENSMUST00000093672 105 ntBASIC2.03□□□□□ -2.08
CopeO89079 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CopeO89079 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CopeO89079 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CopeO89079 Gm12598-201ENSMUST00000117333 830 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm23137-201ENSMUST00000157559 107 ntBASIC2.02□□□□□ -2.09
CopeO89079 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm17161-201ENSMUST00000169187 524 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm27979-201ENSMUST00000185126 56 ntBASIC2.02□□□□□ -2.09
CopeO89079 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CopeO89079 Gm29263-201ENSMUST00000188718 463 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm28384-201ENSMUST00000189079 463 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.02□□□□□ -2.09
CopeO89079 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.02□□□□□ -2.09
CopeO89079 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.02□□□□□ -2.09
CopeO89079 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.02□□□□□ -2.09
CopeO89079 Platr25-208ENSMUST00000222602 939 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm26206-201ENSMUST00000082908 110 ntBASIC2.02□□□□□ -2.09
CopeO89079 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.02□□□□□ -2.09
CopeO89079 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.02□□□□□ -2.09
CopeO89079 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CopeO89079 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
CopeO89079 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.01□□□□□ -2.09
CopeO89079 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CopeO89079 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm24098-201ENSMUST00000102075 109 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm25381-201ENSMUST00000102078 109 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm26015-201ENSMUST00000104402 125 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm22494-201ENSMUST00000104495 128 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm24274-201ENSMUST00000116787 124 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm12934-201ENSMUST00000119221 343 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm13581-201ENSMUST00000120675 278 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm16355-201ENSMUST00000128606 231 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm25637-201ENSMUST00000157529 107 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm9071-201ENSMUST00000165915 474 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CopeO89079 Gm37557-201ENSMUST00000191640 139 ntBASIC2.01□□□□□ -2.09
CopeO89079 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm43083-201ENSMUST00000199594 476 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm44818-201ENSMUST00000206608 358 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.01□□□□□ -2.09
CopeO89079 AC172027.1-201ENSMUST00000217659 337 ntBASIC2.01□□□□□ -2.09
CopeO89079 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.01□□□□□ -2.09
CopeO89079 AC131068.1-201ENSMUST00000226891 482 ntBASIC2.01□□□□□ -2.09
CopeO89079 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CopeO89079 Snord14d-201ENSMUST00000083424 86 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm22740-201ENSMUST00000083439 109 ntBASIC2.01□□□□□ -2.09
CopeO89079 Gm36944-201ENSMUST00000192257 2759 ntBASIC2□□□□□ -2.09
CopeO89079 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2□□□□□ -2.09
CopeO89079 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CopeO89079 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CopeO89079 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2□□□□□ -2.09
CopeO89079 Gm25090-201ENSMUST00000104000 132 ntBASIC2□□□□□ -2.09
CopeO89079 Gm22885-201ENSMUST00000157410 107 ntBASIC2□□□□□ -2.09
CopeO89079 Gm22554-201ENSMUST00000157798 147 ntBASIC2□□□□□ -2.09
CopeO89079 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CopeO89079 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CopeO89079 Gm24304-201ENSMUST00000177635 107 ntBASIC2□□□□□ -2.09
CopeO89079 Mir6916-201ENSMUST00000184514 63 ntBASIC2□□□□□ -2.09
CopeO89079 Gm17790-201ENSMUST00000191545 1228 ntBASIC2□□□□□ -2.09
CopeO89079 Gm43804-201ENSMUST00000198280 456 ntBASIC2□□□□□ -2.09
CopeO89079 Gm44472-201ENSMUST00000204922 943 ntBASIC2□□□□□ -2.09
CopeO89079 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2□□□□□ -2.09
CopeO89079 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2□□□□□ -2.09
CopeO89079 Gm45772-201ENSMUST00000212961 240 ntBASIC2□□□□□ -2.09
CopeO89079 AC144628.2-201ENSMUST00000227374 352 ntBASIC2□□□□□ -2.09
CopeO89079 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
CopeO89079 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2□□□□□ -2.09
CopeO89079 Gm25124-201ENSMUST00000083345 164 ntBASIC2□□□□□ -2.09
CopeO89079 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.99□□□□□ -2.09
CopeO89079 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
CopeO89079 Gm22270-201ENSMUST00000104034 132 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm14894-201ENSMUST00000117170 270 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm15896-201ENSMUST00000118045 440 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm15223-201ENSMUST00000120989 826 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm11430-201ENSMUST00000121317 217 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.99□□□□□ -2.09
CopeO89079 Gm23469-201ENSMUST00000157131 104 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm26345-201ENSMUST00000157534 120 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm25863-201ENSMUST00000158249 329 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CopeO89079 Gm17162-201ENSMUST00000168538 473 ntBASIC1.99□□□□□ -2.09
CopeO89079 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm23933-201ENSMUST00000178405 79 ntBASIC1.99□□□□□ -2.09
CopeO89079 Mir6541-201ENSMUST00000183649 110 ntBASIC1.99□□□□□ -2.09
CopeO89079 Gm28755-201ENSMUST00000185773 199 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 484.3 ms