Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm18448-201ENSMUST00000186286 599 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm28466-201ENSMUST00000190678 659 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm43407-201ENSMUST00000199816 317 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 Gm6590-201ENSMUST00000203343 687 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.73□□□□□ -2.13
Sdc4O35988 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Sdc4O35988 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.73□□□□□ -2.13
Sdc4O35988 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Sdc4O35988 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.73□□□□□ -2.13
Sdc4O35988 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC1.73□□□□□ -2.13
Sdc4O35988 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Sdc4O35988 Gm24165-201ENSMUST00000082718 128 ntBASIC1.73□□□□□ -2.13
Sdc4O35988 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Sdc4O35988 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm26396-201ENSMUST00000104093 132 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm24126-201ENSMUST00000104111 106 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
Sdc4O35988 Gm15067-201ENSMUST00000119534 156 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm15692-201ENSMUST00000152173 352 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm22769-201ENSMUST00000158367 98 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Sdc4O35988 Gm9541-201ENSMUST00000188409 502 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm43431-201ENSMUST00000198577 340 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm42474-201ENSMUST00000201073 505 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm44857-201ENSMUST00000208331 196 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Sdc4O35988 Gm4921-201ENSMUST00000219804 992 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm22444-201ENSMUST00000093693 108 ntBASIC1.72□□□□□ -2.13
Sdc4O35988 Gm22151-201ENSMUST00000116963 58 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm13046-201ENSMUST00000117391 501 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm15126-201ENSMUST00000118631 833 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm13424-201ENSMUST00000122301 354 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm22843-201ENSMUST00000157710 134 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm25368-201ENSMUST00000158847 131 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Sdc4O35988 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Sdc4O35988 Gm27869-201ENSMUST00000184327 122 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm28383-201ENSMUST00000187563 139 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm29262-201ENSMUST00000190084 196 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.71□□□□□ -2.14
Sdc4O35988 AC154636.3-201ENSMUST00000221489 1214 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Sdc4O35988 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Sdc4O35988 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.71□□□□□ -2.14
Sdc4O35988 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Sdc4O35988 Gm22293-201ENSMUST00000083314 109 ntBASIC1.71□□□□□ -2.14
Sdc4O35988 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.7□□□□□ -2.14
Sdc4O35988 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Sdc4O35988 Gm42465-201ENSMUST00000197036 492 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Gm43676-201ENSMUST00000197532 540 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.7□□□□□ -2.14
Sdc4O35988 Gm19074-201ENSMUST00000218915 1429 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Gm46312-201ENSMUST00000220961 420 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Gm26439-201ENSMUST00000082592 106 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Gm24406-201ENSMUST00000083026 128 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Mir93-201ENSMUST00000083593 88 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.7□□□□□ -2.14
Sdc4O35988 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Sdc4O35988 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
Sdc4O35988 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Sdc4O35988 Gm15183-201ENSMUST00000118933 348 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm14800-201ENSMUST00000122084 1272 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm24854-201ENSMUST00000158025 98 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Sdc4O35988 Gm5900-201ENSMUST00000179862 375 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm27161-201ENSMUST00000183960 562 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm28779-201ENSMUST00000189678 323 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm38281-201ENSMUST00000192301 315 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.69□□□□□ -2.14
Sdc4O35988 Gm18340-201ENSMUST00000196342 609 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm3442-201ENSMUST00000216808 710 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 AC122901.2-201ENSMUST00000216926 285 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm25636-201ENSMUST00000082666 133 ntBASIC1.69□□□□□ -2.14
Sdc4O35988 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Sdc4O35988 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.69□□□□□ -2.14
Sdc4O35988 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
Sdc4O35988 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Sdc4O35988 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Sdc4O35988 Gm6954-201ENSMUST00000117416 225 ntBASIC1.68□□□□□ -2.14
Sdc4O35988 Gm14709-201ENSMUST00000121225 304 ntBASIC1.68□□□□□ -2.14
Sdc4O35988 Gm12368-201ENSMUST00000122251 434 ntBASIC1.68□□□□□ -2.14
Sdc4O35988 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc4O35988 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc4O35988 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc4O35988 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc4O35988 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc4O35988 Gm43865-201ENSMUST00000204721 127 ntBASIC1.68□□□□□ -2.14
Sdc4O35988 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.68□□□□□ -2.14
Sdc4O35988 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc4O35988 AC101945.3-201ENSMUST00000226568 153 ntBASIC1.68□□□□□ -2.14
Sdc4O35988 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Sdc4O35988 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Sdc4O35988 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms