Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Gm24863-201ENSMUST00000179499 107 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm28794-201ENSMUST00000185276 136 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm17790-201ENSMUST00000191545 1228 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Mir7232-201ENSMUST00000197929 74 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.02□□□□□ -2.09
Chd3B1AR17 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.02□□□□□ -2.09
Chd3B1AR17 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.02□□□□□ -2.09
Chd3B1AR17 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm24044-201ENSMUST00000083107 156 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm21286-201ENSMUST00000098035 545 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm11357-201ENSMUST00000119758 954 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm2878-201ENSMUST00000170173 486 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm18415-201ENSMUST00000177464 647 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Gm42516-201ENSMUST00000198691 767 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Mir7217-201ENSMUST00000200304 62 ntBASIC2.02□□□□□ -2.09
Chd3B1AR17 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Chd3B1AR17 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm26080-201ENSMUST00000104069 131 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm25832-201ENSMUST00000104140 130 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm17655-201ENSMUST00000167969 255 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.01□□□□□ -2.09
Chd3B1AR17 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.01□□□□□ -2.09
Chd3B1AR17 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm19457-201ENSMUST00000200995 448 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm2544-201ENSMUST00000222702 756 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Mir344-201ENSMUST00000083634 95 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Chd3B1AR17 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Chd3B1AR17 Gm27013-202ENSMUST00000205067 1436 ntBASIC2.01□□□□□ -2.09
Chd3B1AR17 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Chd3B1AR17 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Chd3B1AR17 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Chd3B1AR17 Gm24771-201ENSMUST00000158508 137 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2□□□□□ -2.09
Chd3B1AR17 Gm16289-201ENSMUST00000162079 183 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Mir9-3-201ENSMUST00000175497 90 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2□□□□□ -2.09
Chd3B1AR17 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
Chd3B1AR17 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Chd3B1AR17 Gm14404-201ENSMUST00000119117 1660 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm13082-201ENSMUST00000118877 561 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2□□□□□ -2.09
Chd3B1AR17 Gm24478-201ENSMUST00000157439 158 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC2□□□□□ -2.09
Chd3B1AR17 Gm26864-201ENSMUST00000181346 156 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm27522-201ENSMUST00000183949 230 ntBASIC2□□□□□ -2.09
Chd3B1AR17 AL772271.1-201ENSMUST00000196848 65 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm45146-201ENSMUST00000207108 221 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm7675-201ENSMUST00000208828 686 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2□□□□□ -2.09
Chd3B1AR17 AC132384.11-201ENSMUST00000219676 178 ntBASIC2□□□□□ -2.09
Chd3B1AR17 AC163646.2-201ENSMUST00000227962 141 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm22723-201ENSMUST00000083820 129 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Gm23058-201ENSMUST00000093703 107 ntBASIC2□□□□□ -2.09
Chd3B1AR17 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Chd3B1AR17 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Chd3B1AR17 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm23708-201ENSMUST00000104367 123 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm15125-201ENSMUST00000116185 800 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm12935-201ENSMUST00000119352 246 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm24237-201ENSMUST00000157790 132 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm26024-201ENSMUST00000158657 322 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm27753-201ENSMUST00000184742 203 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm37557-201ENSMUST00000191640 139 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm7039-201ENSMUST00000205138 346 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Gm25813-201ENSMUST00000082748 191 ntBASIC1.99□□□□□ -2.09
Chd3B1AR17 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Chd3B1AR17 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Chd3B1AR17 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Chd3B1AR17 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Chd3B1AR17 Snord71-201ENSMUST00000104361 85 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 Gm22151-201ENSMUST00000116963 58 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 Gm23958-201ENSMUST00000157207 105 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 Gm26345-201ENSMUST00000157534 120 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Chd3B1AR17 Gm18340-201ENSMUST00000196342 609 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC1.98□□□□□ -2.09
Chd3B1AR17 Gm17890-201ENSMUST00000221419 757 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Chd3B1AR17 AC134254.4-201ENSMUST00000223086 370 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.98□□□□□ -2.09
Chd3B1AR17 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms