Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm22062-201ENSMUST00000082563 107 ntBASIC4.25□□□□□ -1.73
Ccdc9bA3KGF9 Gm23454-201ENSMUST00000083332 133 ntBASIC4.25□□□□□ -1.73
Ccdc9bA3KGF9 Mir471-201ENSMUST00000093596 67 ntBASIC4.25□□□□□ -1.73
Ccdc9bA3KGF9 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ccdc9bA3KGF9 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.25□□□□□ -1.73
Ccdc9bA3KGF9 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.25□□□□□ -1.73
Ccdc9bA3KGF9 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ccdc9bA3KGF9 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm44049-201ENSMUST00000204905 2984 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm13729-201ENSMUST00000120328 406 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm25392-201ENSMUST00000157335 297 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm25664-201ENSMUST00000157697 107 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm9818-201ENSMUST00000050900 255 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm24166-201ENSMUST00000082724 135 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm5591-201ENSMUST00000079759 3441 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.24□□□□□ -1.73
Ccdc9bA3KGF9 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Olfr1469-202ENSMUST00000216910 4106 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm23746-201ENSMUST00000104229 125 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm14714-201ENSMUST00000119743 439 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm13132-201ENSMUST00000121194 472 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm15263-201ENSMUST00000121556 642 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm14770-201ENSMUST00000122197 312 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Trav20-201ENSMUST00000142754 347 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm25425-201ENSMUST00000157611 96 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm22766-201ENSMUST00000158372 99 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm5777-201ENSMUST00000177265 448 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Mir7047-201ENSMUST00000184595 64 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm28453-203ENSMUST00000187041 189 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm28097-201ENSMUST00000187333 366 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm43604-201ENSMUST00000199799 705 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm18462-201ENSMUST00000208112 417 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm23517-201ENSMUST00000082830 192 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.23□□□□□ -1.73
Ccdc9bA3KGF9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm22758-201ENSMUST00000102275 96 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm14516-201ENSMUST00000120012 252 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm22107-201ENSMUST00000122548 100 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm27733-201ENSMUST00000184803 68 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm27540-201ENSMUST00000184950 187 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm37417-201ENSMUST00000195257 454 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm7041-201ENSMUST00000201227 524 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm44402-201ENSMUST00000203677 238 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm44519-201ENSMUST00000206486 122 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm29774-201ENSMUST00000219270 436 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm23464-201ENSMUST00000083145 147 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 AC126673.1-201ENSMUST00000223208 3856 ntBASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ccdc9bA3KGF9 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms