Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm11556-201ENSMUST00000120751 288 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm14736-201ENSMUST00000121470 336 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm12372-201ENSMUST00000121654 768 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm29299-201ENSMUST00000185609 923 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm29573-201ENSMUST00000190291 919 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm43431-201ENSMUST00000198577 340 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 Gm18645-202ENSMUST00000212222 760 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 AC155167.3-201ENSMUST00000226349 217 ntBASIC1.25□□□□□ -2.21
Col6a4A2AX52 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Col6a4A2AX52 Mir804-201ENSMUST00000103251 95 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm25787-201ENSMUST00000104709 92 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm14867-201ENSMUST00000120156 866 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm22957-201ENSMUST00000122511 123 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm13194-201ENSMUST00000142299 311 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm24677-201ENSMUST00000158755 150 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm26701-201ENSMUST00000181571 234 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm6060-201ENSMUST00000188671 251 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm15235-201ENSMUST00000200572 194 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm18188-201ENSMUST00000219386 478 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm25739-201ENSMUST00000082886 107 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm25038-201ENSMUST00000082928 130 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm23723-201ENSMUST00000082996 132 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm7164-201ENSMUST00000117503 450 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm13153-201ENSMUST00000120969 637 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Mir5099-201ENSMUST00000175257 74 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Npn2-202ENSMUST00000189275 235 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm37281-201ENSMUST00000192412 439 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm37418-201ENSMUST00000195031 274 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm31532-201ENSMUST00000203555 767 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm45742-201ENSMUST00000212400 433 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 AC159293.2-201ENSMUST00000222289 424 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Gm25080-201ENSMUST00000082526 107 ntBASIC1.24□□□□□ -2.21
Col6a4A2AX52 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Col6a4A2AX52 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
Col6a4A2AX52 Gm15282-201ENSMUST00000117707 300 ntBASIC1.23□□□□□ -2.21
Col6a4A2AX52 Gm22563-201ENSMUST00000157333 269 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms