Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Gm44133-202ENSMUST00000204450 2586 ntBASIC1.79□□□□□ -2.12
Trav11A0A0B4J1J9 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Mir706-201ENSMUST00000102262 84 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm25500-201ENSMUST00000104426 123 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm14359-201ENSMUST00000118883 424 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm14240-201ENSMUST00000120353 546 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm7071-201ENSMUST00000120458 462 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm14360-201ENSMUST00000120670 393 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm9498-201ENSMUST00000140849 291 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm14368-201ENSMUST00000145305 415 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm23980-201ENSMUST00000157135 158 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm22277-201ENSMUST00000157204 277 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm22098-201ENSMUST00000157930 85 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm23223-201ENSMUST00000158119 127 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm17063-201ENSMUST00000168135 456 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm26991-201ENSMUST00000180950 620 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Mir7242-201ENSMUST00000183710 79 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm3489-201ENSMUST00000190083 528 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm6321-201ENSMUST00000194460 1090 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm8023-201ENSMUST00000195298 903 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm45445-201ENSMUST00000209586 232 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm22974-201ENSMUST00000083301 103 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Mir423-201ENSMUST00000083584 109 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Olfr895-201ENSMUST00000093864 951 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 AC117199.1-201ENSMUST00000219940 3132 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.78□□□□□ -2.12
Trav11A0A0B4J1J9 Gm45178-201ENSMUST00000207744 4110 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm12755-201ENSMUST00000122297 282 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 DQ267100-201ENSMUST00000122600 72 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm16355-201ENSMUST00000128606 231 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm2020-201ENSMUST00000145242 579 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm24716-201ENSMUST00000157524 104 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm22611-201ENSMUST00000158288 150 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm24553-201ENSMUST00000158653 131 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm28163-201ENSMUST00000187099 325 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm37455-201ENSMUST00000191993 529 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm38213-201ENSMUST00000193203 173 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm44392-201ENSMUST00000196758 115 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm6615-201ENSMUST00000199426 631 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm44524-201ENSMUST00000203899 271 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm44459-201ENSMUST00000203926 160 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm44615-201ENSMUST00000206548 358 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm8940-201ENSMUST00000212585 219 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 AC171206.2-201ENSMUST00000215252 389 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr807-201ENSMUST00000059038 997 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm22247-201ENSMUST00000082476 131 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Gm23645-201ENSMUST00000083228 108 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 AC153967.1-201ENSMUST00000219333 3190 ntBASIC1.77□□□□□ -2.13
Trav11A0A0B4J1J9 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm25308-201ENSMUST00000104171 158 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm13331-201ENSMUST00000117500 448 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm12697-201ENSMUST00000118008 667 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm13876-201ENSMUST00000118451 261 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm14593-201ENSMUST00000119948 294 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm22554-201ENSMUST00000157798 147 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm24879-201ENSMUST00000158386 143 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm22947-201ENSMUST00000158559 91 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm23268-201ENSMUST00000175494 78 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm20718-201ENSMUST00000176058 259 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Mir7667-201ENSMUST00000183866 63 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm38311-201ENSMUST00000192945 165 ntBASIC1.76□□□□□ -2.13
Trav11A0A0B4J1J9 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC1.76□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms