Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm14765-201ENSMUST00000121954 326 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm25341-201ENSMUST00000157461 268 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm24901-201ENSMUST00000158125 110 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm17162-201ENSMUST00000168538 473 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm20534-201ENSMUST00000172957 172 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm22851-201ENSMUST00000178741 94 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm25074-201ENSMUST00000178782 94 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm25361-201ENSMUST00000179358 76 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm22631-201ENSMUST00000179656 94 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm11395-201ENSMUST00000181011 499 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm29330-201ENSMUST00000190032 699 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm28098-201ENSMUST00000191361 699 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm8023-201ENSMUST00000195298 903 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm43521-201ENSMUST00000197838 255 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm43107-201ENSMUST00000198729 255 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Gm18774-201ENSMUST00000218269 601 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.54□□□□□ -2
Trav1A0A075B5Z4 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm9850-201ENSMUST00000117916 227 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm8217-201ENSMUST00000119136 465 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm14159-201ENSMUST00000119832 451 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm13574-201ENSMUST00000120482 394 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm11456-201ENSMUST00000121070 256 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm15077-201ENSMUST00000122344 362 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm25283-201ENSMUST00000157272 77 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm24879-201ENSMUST00000158386 143 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm24552-201ENSMUST00000158646 103 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm22367-201ENSMUST00000178930 132 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm24464-201ENSMUST00000179697 107 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm27786-201ENSMUST00000184337 70 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm28299-201ENSMUST00000189908 339 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm24350-202ENSMUST00000198309 132 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Gm23847-201ENSMUST00000083829 110 ntBASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.53□□□□□ -2
Trav1A0A075B5Z4 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.53□□□□□ -2.01
Trav1A0A075B5Z4 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Trav1A0A075B5Z4 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm25500-201ENSMUST00000104426 123 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm14973-201ENSMUST00000117248 255 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm7916-201ENSMUST00000120325 456 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm25280-201ENSMUST00000157269 101 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm24061-201ENSMUST00000157489 120 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm25637-201ENSMUST00000157529 107 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm24240-201ENSMUST00000157785 135 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm22651-201ENSMUST00000157872 94 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm20689-201ENSMUST00000176033 279 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm22633-201ENSMUST00000179834 107 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm21729-201ENSMUST00000180058 664 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm21853-201ENSMUST00000180071 664 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm27313-201ENSMUST00000183500 142 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm29216-201ENSMUST00000187117 492 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm29495-201ENSMUST00000189319 664 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm19147-201ENSMUST00000199622 652 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm44703-201ENSMUST00000205724 248 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm45387-201ENSMUST00000209792 632 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm4921-201ENSMUST00000219804 992 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.52□□□□□ -2.01
Trav1A0A075B5Z4 Gm9762-201ENSMUST00000036976 444 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms