Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm22507-201ENSMUST00000082773 160 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Snord14d-201ENSMUST00000083424 86 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Olfr1160-201ENSMUST00000099839 960 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Mir667-201ENSMUST00000102441 92 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm15125-201ENSMUST00000116185 800 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm15896-201ENSMUST00000118045 440 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm25107-201ENSMUST00000122472 129 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm23967-201ENSMUST00000175062 78 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm26701-201ENSMUST00000181571 234 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm8676-201ENSMUST00000184206 637 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm28169-201ENSMUST00000190342 345 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 AC126043.1-201ENSMUST00000221304 1141 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 AC122393.3-201ENSMUST00000226343 1059 ntBASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Scn8aQ9WTU3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm12876-201ENSMUST00000120975 408 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm11344-201ENSMUST00000122011 335 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm42465-201ENSMUST00000197036 492 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 AC153506.2-201ENSMUST00000218051 257 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 AC113031.2-201ENSMUST00000226132 579 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm23975-201ENSMUST00000082685 106 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm20534-201ENSMUST00000172957 172 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm27869-201ENSMUST00000184327 122 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm44476-201ENSMUST00000196225 91 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm45023-201ENSMUST00000207951 379 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm45696-201ENSMUST00000212088 985 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 AC158142.3-201ENSMUST00000226230 675 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 CT030238.4-201ENSMUST00000228579 801 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Mir320-201ENSMUST00000083594 82 ntBASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Scn8aQ9WTU3 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm26082-201ENSMUST00000104070 127 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm6461-201ENSMUST00000120015 633 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm13131-201ENSMUST00000122228 321 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm22225-201ENSMUST00000157358 278 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm24076-201ENSMUST00000158179 94 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm22665-201ENSMUST00000158720 275 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm17186-201ENSMUST00000171742 456 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm28647-201ENSMUST00000188416 197 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Gm37098-201ENSMUST00000192290 244 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 AC126275.1-201ENSMUST00000224881 446 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 CT025525.3-201ENSMUST00000228858 366 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC1.66□□□□□ -2.14
Scn8aQ9WTU3 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 Gm2005-201ENSMUST00000120759 542 ntBASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 Gm24060-201ENSMUST00000157494 95 ntBASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
Scn8aQ9WTU3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Gm13678-201ENSMUST00000118926 340 ntBASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Mir6950-201ENSMUST00000184438 73 ntBASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Gm28058-201ENSMUST00000186421 264 ntBASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Gm29740-201ENSMUST00000193182 655 ntBASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Gm24151-201ENSMUST00000082758 141 ntBASIC1.65□□□□□ -2.15
Scn8aQ9WTU3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm14910-201ENSMUST00000121037 1805 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm15488-201ENSMUST00000121682 670 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm26186-201ENSMUST00000157689 125 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Mir6379-201ENSMUST00000183392 115 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm25739-201ENSMUST00000082886 107 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm25199-201ENSMUST00000083095 104 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 AC117226.1-201ENSMUST00000221635 3737 ntBASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Scn8aQ9WTU3 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Gm14894-201ENSMUST00000117170 270 ntBASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Gm26181-201ENSMUST00000157687 106 ntBASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Gm23205-201ENSMUST00000158671 103 ntBASIC1.63□□□□□ -2.15
Scn8aQ9WTU3 Gm23415-201ENSMUST00000175519 83 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms