Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm15846-201ENSMUST00000116022 320 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Defa-ps15-201ENSMUST00000118178 477 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm12617-201ENSMUST00000121268 381 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm13345-201ENSMUST00000121928 228 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm25664-201ENSMUST00000157697 107 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm2962-201ENSMUST00000159266 336 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm5258-201ENSMUST00000165437 327 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm20542-201ENSMUST00000174582 372 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Mir6383-201ENSMUST00000184545 116 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm28263-201ENSMUST00000185884 400 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm44474-201ENSMUST00000196525 127 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 AC123803.1-201ENSMUST00000216093 189 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 AC117240.2-201ENSMUST00000220921 263 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm18441-201ENSMUST00000223539 617 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm9818-201ENSMUST00000050900 255 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Mir181b-2-201ENSMUST00000083644 89 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm38073-201ENSMUST00000195141 3665 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Gm45137-201ENSMUST00000208652 4415 ntBASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
Prpf40aQ9R1C7 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm12760-201ENSMUST00000117861 482 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm14861-201ENSMUST00000119451 455 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm24507-201ENSMUST00000157683 134 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm24636-201ENSMUST00000158673 288 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm25019-201ENSMUST00000179732 110 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Igkv9-128-201ENSMUST00000196602 353 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm43828-201ENSMUST00000196890 639 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm23454-201ENSMUST00000083332 133 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Mir471-201ENSMUST00000093596 67 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm42986-201ENSMUST00000201618 3385 ntBASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Prpf40aQ9R1C7 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Mir193b-201ENSMUST00000103784 79 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm23608-201ENSMUST00000104545 128 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm13714-201ENSMUST00000117313 221 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm5391-201ENSMUST00000121155 613 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm14770-201ENSMUST00000122197 312 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Trav20-201ENSMUST00000142754 347 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm25392-201ENSMUST00000157335 297 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm25425-201ENSMUST00000157611 96 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm24675-201ENSMUST00000158757 259 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm22062-201ENSMUST00000082563 107 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Prpf40aQ9R1C7 Olfr665-202ENSMUST00000215761 2522 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms