Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm24304-201ENSMUST00000177635 107 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm26177-201ENSMUST00000178683 107 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm37743-201ENSMUST00000194645 376 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm43007-201ENSMUST00000197618 291 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm44324-201ENSMUST00000198517 135 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm43171-201ENSMUST00000199882 291 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm24147-201ENSMUST00000082763 144 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm22154-201ENSMUST00000083844 131 ntBASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Trem1Q9JKE2 Gm25272-201ENSMUST00000104293 128 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm24376-201ENSMUST00000104399 127 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm11357-201ENSMUST00000119758 954 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm2020-201ENSMUST00000145242 579 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm24681-201ENSMUST00000158760 107 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm24878-201ENSMUST00000158782 104 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm3470-201ENSMUST00000160819 420 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Mir5710-201ENSMUST00000176884 69 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm25360-201ENSMUST00000178786 191 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm29104-201ENSMUST00000186304 222 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm43286-201ENSMUST00000197420 424 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm46136-201ENSMUST00000214730 565 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm24044-201ENSMUST00000083107 156 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm26494-201ENSMUST00000083154 143 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm22974-201ENSMUST00000083301 103 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Mir346-201ENSMUST00000083547 98 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm24493-201ENSMUST00000083805 143 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 AC125532.1-201ENSMUST00000216210 2334 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Trem1Q9JKE2 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm11845-201ENSMUST00000117886 327 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm14240-201ENSMUST00000120353 546 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm24443-201ENSMUST00000157242 132 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm23667-201ENSMUST00000157466 120 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Mir5101-201ENSMUST00000175181 83 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm25817-201ENSMUST00000177758 121 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm24766-201ENSMUST00000179182 121 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm28666-201ENSMUST00000186649 274 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm37455-201ENSMUST00000191993 529 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm37319-201ENSMUST00000193500 636 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Mir7217-201ENSMUST00000200304 62 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm2544-201ENSMUST00000222702 756 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 AC107757.3-201ENSMUST00000226312 535 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm25402-201ENSMUST00000082966 131 ntBASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trem1Q9JKE2 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm26154-201ENSMUST00000102339 96 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm16428-201ENSMUST00000121193 723 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Defa-ps5-201ENSMUST00000121541 279 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm14368-201ENSMUST00000145305 415 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm23324-201ENSMUST00000157421 131 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm23642-201ENSMUST00000157858 258 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm22483-201ENSMUST00000157986 274 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm20718-201ENSMUST00000176058 259 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm25874-201ENSMUST00000178030 79 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Mir6943-201ENSMUST00000185186 66 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm38268-201ENSMUST00000195813 193 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm44392-201ENSMUST00000196758 115 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm32381-201ENSMUST00000203192 476 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm44524-201ENSMUST00000203899 271 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm44966-201ENSMUST00000208096 157 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm7065-201ENSMUST00000222150 474 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Gm24446-201ENSMUST00000083982 156 ntBASIC2.3□□□□□ -2.04
Trem1Q9JKE2 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trem1Q9JKE2 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms