Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm24274-201ENSMUST00000116787 124 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm14670-201ENSMUST00000117327 337 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm11935-201ENSMUST00000118608 399 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm8217-201ENSMUST00000119136 465 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm14731-201ENSMUST00000119216 376 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm16355-201ENSMUST00000128606 231 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm17161-201ENSMUST00000169187 524 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Mir6916-201ENSMUST00000184514 63 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm3724-201ENSMUST00000197957 349 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.58□□□□□ -2.16
Trem3Q9JKE1 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm12235-201ENSMUST00000118596 170 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm14566-201ENSMUST00000118915 321 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm11438-201ENSMUST00000121582 189 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm12706-201ENSMUST00000121588 698 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm15692-201ENSMUST00000152173 352 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm26275-201ENSMUST00000157101 268 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm24783-201ENSMUST00000157639 100 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm25863-201ENSMUST00000158249 329 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm28627-201ENSMUST00000186141 453 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm43083-201ENSMUST00000199594 476 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm19885-201ENSMUST00000212853 343 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Snord14d-201ENSMUST00000083424 86 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
Trem3Q9JKE1 AC122828.3-201ENSMUST00000223019 3915 ntBASIC1.57□□□□□ -2.16
Trem3Q9JKE1 Gm24098-201ENSMUST00000102075 109 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm25381-201ENSMUST00000102078 109 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm12956-201ENSMUST00000122184 414 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm23137-201ENSMUST00000157559 107 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm22500-201ENSMUST00000158982 99 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm17063-201ENSMUST00000168135 456 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm4540-201ENSMUST00000170669 429 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Mir5129-201ENSMUST00000174938 78 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm29641-201ENSMUST00000188955 259 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm38075-201ENSMUST00000191979 920 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 AC164597.2-201ENSMUST00000226738 603 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm23628-201ENSMUST00000082464 173 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Trem3Q9JKE1 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm25090-201ENSMUST00000104000 132 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm15896-201ENSMUST00000118045 440 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm15381-201ENSMUST00000121501 1156 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm26345-201ENSMUST00000157534 120 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm23933-201ENSMUST00000178405 79 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm26622-201ENSMUST00000180520 298 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm27399-201ENSMUST00000184250 78 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm27544-201ENSMUST00000185069 155 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm19694-201ENSMUST00000192364 505 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm42924-201ENSMUST00000197261 185 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm7946-201ENSMUST00000203326 958 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm44058-201ENSMUST00000204335 467 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm43865-201ENSMUST00000204721 127 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.55□□□□□ -2.16
Trem3Q9JKE1 Gm20304-201ENSMUST00000218168 444 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms