Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Lima1Q9ERG0 Gm11490-201ENSMUST00000118128 272 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm14593-201ENSMUST00000119948 294 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm12706-201ENSMUST00000121588 698 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm22093-201ENSMUST00000158980 111 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm38075-201ENSMUST00000191979 920 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm19694-201ENSMUST00000192364 505 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm19089-201ENSMUST00000197207 613 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm43284-201ENSMUST00000200103 253 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm46146-201ENSMUST00000217483 346 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm23104-201ENSMUST00000083722 104 ntBASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Lima1Q9ERG0 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm15159-201ENSMUST00000117062 764 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm14894-201ENSMUST00000117170 270 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm649-201ENSMUST00000117284 1054 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm15113-201ENSMUST00000119280 836 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm25666-201ENSMUST00000157702 107 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm24960-201ENSMUST00000157923 90 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm23704-201ENSMUST00000158844 340 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm19224-201ENSMUST00000190477 793 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm37449-201ENSMUST00000193016 270 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm18658-201ENSMUST00000195558 270 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm42924-201ENSMUST00000197261 185 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm44083-201ENSMUST00000203114 337 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Lima1Q9ERG0 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.09□□□□□ -2.08
Lima1Q9ERG0 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.09□□□□□ -2.08
Lima1Q9ERG0 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26504-201ENSMUST00000102033 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm12793-201ENSMUST00000119268 292 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm16053-201ENSMUST00000120511 188 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm14979-201ENSMUST00000121561 1035 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm25981-201ENSMUST00000157921 295 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm25460-201ENSMUST00000157954 127 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm24080-201ENSMUST00000175178 232 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26502-201ENSMUST00000177732 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm25350-201ENSMUST00000177849 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm23446-201ENSMUST00000177977 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26201-201ENSMUST00000178047 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm24711-201ENSMUST00000178062 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm24609-201ENSMUST00000178166 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm23265-201ENSMUST00000178321 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm22812-201ENSMUST00000178329 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26246-201ENSMUST00000178388 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm25155-201ENSMUST00000178450 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm24760-201ENSMUST00000178530 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm22285-201ENSMUST00000178576 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm22417-201ENSMUST00000178656 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm26270-201ENSMUST00000178690 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm23313-201ENSMUST00000178931 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.08□□□□□ -2.08
Lima1Q9ERG0 Gm23089-201ENSMUST00000178947 94 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms