Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm16533-201ENSMUST00000140035 228 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm25557-201ENSMUST00000158084 315 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm26652-202ENSMUST00000181672 475 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm27580-201ENSMUST00000183666 149 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Gm19457-201ENSMUST00000200995 448 ntBASIC2.96□□□□□ -1.94
Scn4aQ9ER60 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Mir667-201ENSMUST00000102441 92 ntBASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Gm14602-201ENSMUST00000118625 340 ntBASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Gm25910-201ENSMUST00000157620 140 ntBASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Gm42958-201ENSMUST00000197595 318 ntBASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Gm43659-201ENSMUST00000200894 628 ntBASIC2.95□□□□□ -1.94
Scn4aQ9ER60 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Scn4aQ9ER60 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.95□□□□□ -1.94
Scn4aQ9ER60 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm12432-201ENSMUST00000119540 186 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm16129-201ENSMUST00000152628 486 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm26277-201ENSMUST00000157097 152 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm16561-201ENSMUST00000163001 192 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm29288-201ENSMUST00000191582 901 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm38213-201ENSMUST00000193203 173 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm44058-201ENSMUST00000204335 467 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm19244-201ENSMUST00000204340 253 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm19177-201ENSMUST00000204520 613 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm44938-201ENSMUST00000208614 427 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm9973-202ENSMUST00000220926 166 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.94□□□□□ -1.94
Scn4aQ9ER60 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm13273-201ENSMUST00000119737 159 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm25831-201ENSMUST00000158924 163 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm22093-201ENSMUST00000158980 111 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm28744-201ENSMUST00000189939 340 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm37438-201ENSMUST00000192813 393 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm42465-201ENSMUST00000197036 492 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm18252-203ENSMUST00000215855 757 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Mir448-201ENSMUST00000083516 112 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm20811-201ENSMUST00000190500 553 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm44011-201ENSMUST00000203336 394 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 AC152951.1-201ENSMUST00000218907 266 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.93□□□□□ -1.94
Scn4aQ9ER60 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 AC102575.1-201ENSMUST00000225348 547 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm23140-201ENSMUST00000082487 107 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.93□□□□□ -1.94
Scn4aQ9ER60 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Mir301b-201ENSMUST00000102333 97 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm11876-201ENSMUST00000120002 269 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm14713-201ENSMUST00000122362 686 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm20648-201ENSMUST00000175815 328 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 CT009733.1-203ENSMUST00000224033 451 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.92□□□□□ -1.94
Scn4aQ9ER60 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm23256-201ENSMUST00000102235 110 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm25317-201ENSMUST00000116824 129 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm11693-201ENSMUST00000119625 565 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm23887-201ENSMUST00000122683 172 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Gm16328-201ENSMUST00000126985 196 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Scn4aQ9ER60 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Scn4aQ9ER60 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms