Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
Cdc40Q9DC48 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l9-201ENSMUST00000101891 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm26504-201ENSMUST00000102033 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm25529-201ENSMUST00000104850 92 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm14579-201ENSMUST00000117068 283 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm13806-201ENSMUST00000117822 325 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm14359-201ENSMUST00000118883 424 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm14989-201ENSMUST00000120497 207 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm14360-201ENSMUST00000120670 393 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm14363-201ENSMUST00000122304 409 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm9498-201ENSMUST00000140849 291 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm24475-201ENSMUST00000157435 143 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm22011-201ENSMUST00000158790 123 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm17119-201ENSMUST00000163943 280 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Mir3075-201ENSMUST00000175340 85 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm26502-201ENSMUST00000177732 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l13-201ENSMUST00000177737 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm25350-201ENSMUST00000177849 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l15-201ENSMUST00000177940 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm23446-201ENSMUST00000177977 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l4-201ENSMUST00000177982 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm26201-201ENSMUST00000178047 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm24711-201ENSMUST00000178062 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm24609-201ENSMUST00000178166 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm23265-201ENSMUST00000178321 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm22812-201ENSMUST00000178329 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l3-201ENSMUST00000178370 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm26246-201ENSMUST00000178388 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm25155-201ENSMUST00000178450 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm24760-201ENSMUST00000178530 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm22285-201ENSMUST00000178576 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm22417-201ENSMUST00000178656 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm26270-201ENSMUST00000178690 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm23313-201ENSMUST00000178931 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm23089-201ENSMUST00000178947 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm24153-201ENSMUST00000179280 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm25597-201ENSMUST00000179388 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm25816-201ENSMUST00000179764 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm26188-201ENSMUST00000179963 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm26433-201ENSMUST00000180227 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm22128-201ENSMUST00000180346 94 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm38231-201ENSMUST00000192030 347 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Mir703-201ENSMUST00000197105 109 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 AC125464.1-201ENSMUST00000228013 512 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdc40Q9DC48 Mir350-201ENSMUST00000083639 99 ntBASIC2.32□□□□□ -2.04
Cdc40Q9DC48 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm22534-201ENSMUST00000158173 104 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm16232-201ENSMUST00000162856 167 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Mir7068-201ENSMUST00000183439 74 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm29184-201ENSMUST00000190038 334 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm43284-201ENSMUST00000200103 253 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm17893-201ENSMUST00000203017 770 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm45013-201ENSMUST00000206883 178 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm7753-201ENSMUST00000221007 867 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdc40Q9DC48 n-R5s79-201ENSMUST00000083071 120 ntBASIC2.31□□□□□ -2.04
Cdc40Q9DC48 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms