Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Mir693-201ENSMUST00000102187 89 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm12386-201ENSMUST00000117380 688 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm13803-201ENSMUST00000117547 489 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm8858-201ENSMUST00000118259 342 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm12191-201ENSMUST00000118307 348 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm9703-201ENSMUST00000119573 343 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm15190-201ENSMUST00000120855 276 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm11456-201ENSMUST00000121070 256 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm24730-201ENSMUST00000158228 117 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm23068-201ENSMUST00000158239 293 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm16569-201ENSMUST00000160526 314 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm20672-201ENSMUST00000176605 261 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm23379-201ENSMUST00000180026 107 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm27893-201ENSMUST00000184408 194 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm17906-201ENSMUST00000202480 901 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm44472-201ENSMUST00000204922 943 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm45105-201ENSMUST00000207824 397 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm44594-201ENSMUST00000208982 407 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 AC167192.1-201ENSMUST00000225908 139 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Mir193a-201ENSMUST00000083461 66 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Gm10343-201ENSMUST00000096279 348 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Vps28Q9D1C8 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm24119-201ENSMUST00000103979 246 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm24376-201ENSMUST00000104399 127 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm11845-201ENSMUST00000117886 327 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm12878-201ENSMUST00000118744 332 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm24138-201ENSMUST00000157572 114 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm27245-201ENSMUST00000184385 376 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm27919-201ENSMUST00000185163 107 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Mir208a-201ENSMUST00000083498 83 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Snord38a-201ENSMUST00000083746 71 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.23□□□□□ -1.89
Vps28Q9D1C8 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm15167-201ENSMUST00000121997 187 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm24393-201ENSMUST00000158135 97 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm22611-201ENSMUST00000158288 150 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm22633-201ENSMUST00000179834 107 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm9696-202ENSMUST00000191541 830 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm18964-201ENSMUST00000193013 563 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm44011-201ENSMUST00000203336 394 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm45687-201ENSMUST00000209454 155 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm45395-201ENSMUST00000209891 559 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm24948-201ENSMUST00000082866 207 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Mir137-201ENSMUST00000083635 73 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Gm3563-201ENSMUST00000172963 1628 ntBASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Vps28Q9D1C8 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 162.3 ms