Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Gm10042-201ENSMUST00000079884 78 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Gm23627-201ENSMUST00000082459 107 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Gm22502-201ENSMUST00000082488 107 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Gm22977-201ENSMUST00000082615 107 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Gm24149-201ENSMUST00000082757 107 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.91□□□□□ -1.78
Ddx56Q9D0R4 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Ddx56Q9D0R4 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ddx56Q9D0R4 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ddx56Q9D0R4 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
Ddx56Q9D0R4 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Gm13806-201ENSMUST00000117822 325 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Gm22986-201ENSMUST00000122753 130 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Gm24244-201ENSMUST00000157317 130 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Gm26430-201ENSMUST00000178054 107 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Mir6899-201ENSMUST00000184798 64 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Gm5829-201ENSMUST00000191383 351 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 CT009713.9-201ENSMUST00000223604 389 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 AC124581.4-201ENSMUST00000225874 463 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Gm10242-201ENSMUST00000090064 330 ntBASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Ddx56Q9D0R4 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm14013-201ENSMUST00000119006 270 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm15263-201ENSMUST00000121556 642 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm11363-201ENSMUST00000121672 548 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm23816-201ENSMUST00000179617 132 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm29231-201ENSMUST00000179850 319 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm27834-201ENSMUST00000183427 125 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm18356-201ENSMUST00000185677 623 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm29574-201ENSMUST00000186226 696 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm29352-201ENSMUST00000188054 544 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm28159-201ENSMUST00000190296 696 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm43651-201ENSMUST00000199796 439 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm43441-201ENSMUST00000201458 205 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm19252-201ENSMUST00000204705 305 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm45395-201ENSMUST00000209891 559 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm23723-201ENSMUST00000082996 132 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Ddx56Q9D0R4 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm22758-201ENSMUST00000102275 96 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Mir291a-201ENSMUST00000104815 82 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm15399-201ENSMUST00000118055 724 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm11356-201ENSMUST00000118974 192 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm28000-201ENSMUST00000184380 85 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm43355-201ENSMUST00000196541 346 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Mir129b-201ENSMUST00000197461 65 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm44475-201ENSMUST00000204041 424 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm22365-201ENSMUST00000093750 117 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.88□□□□□ -1.79
Ddx56Q9D0R4 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Mir669l-201ENSMUST00000103771 98 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm26418-201ENSMUST00000104275 137 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm11065-201ENSMUST00000111462 228 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm14287-201ENSMUST00000121060 117 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm6265-201ENSMUST00000149263 231 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm23169-201ENSMUST00000157157 112 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm25339-201ENSMUST00000157458 232 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm24930-201ENSMUST00000158315 83 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm23112-201ENSMUST00000158606 125 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm10357-201ENSMUST00000159886 264 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm17062-201ENSMUST00000166987 461 ntBASIC3.87□□□□□ -1.79
Ddx56Q9D0R4 Gm23191-201ENSMUST00000179147 107 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms