Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
Usp11Q99K46 Gm32447-201ENSMUST00000194265 697 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 Gm44391-201ENSMUST00000198490 93 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 Gm34091-201ENSMUST00000200875 604 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.41□□□□□ -1.86
Usp11Q99K46 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.41□□□□□ -1.86
Usp11Q99K46 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Usp11Q99K46 Gm26055-201ENSMUST00000083038 107 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Usp11Q99K46 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp11Q99K46 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp11Q99K46 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Usp11Q99K46 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp11Q99K46 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Usp11Q99K46 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.41□□□□□ -1.86
Usp11Q99K46 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Usp11Q99K46 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Usp11Q99K46 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
Usp11Q99K46 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm24671-201ENSMUST00000104159 158 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm22590-201ENSMUST00000104247 128 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Mir294-201ENSMUST00000104710 84 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm12982-201ENSMUST00000117408 190 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm14537-201ENSMUST00000117464 599 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm12787-201ENSMUST00000119234 396 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm13511-201ENSMUST00000121167 363 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm11849-201ENSMUST00000121293 261 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.4□□□□□ -1.87
Usp11Q99K46 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Usp11Q99K46 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm23667-201ENSMUST00000157466 120 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm24534-201ENSMUST00000157949 291 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm25335-201ENSMUST00000158043 103 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm20794-201ENSMUST00000177626 628 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm24518-201ENSMUST00000180275 94 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Mir6951-201ENSMUST00000183910 75 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Mir6372-201ENSMUST00000185114 109 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm18956-201ENSMUST00000192857 480 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm32381-201ENSMUST00000203192 476 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.4□□□□□ -1.87
Usp11Q99K46 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.4□□□□□ -1.87
Usp11Q99K46 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Usp11Q99K46 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Usp11Q99K46 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Usp11Q99K46 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm14825-201ENSMUST00000113538 701 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm12386-201ENSMUST00000117380 688 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm14657-201ENSMUST00000117461 302 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm15142-201ENSMUST00000121013 856 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm11582-201ENSMUST00000121041 236 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm8880-201ENSMUST00000121800 454 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm22107-201ENSMUST00000122548 100 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm22036-201ENSMUST00000157279 215 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm24419-201ENSMUST00000157875 332 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm23016-201ENSMUST00000158431 62 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm24819-201ENSMUST00000175094 166 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm24810-201ENSMUST00000175317 70 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Mir3106-201ENSMUST00000175401 82 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm28069-201ENSMUST00000189926 214 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm38050-201ENSMUST00000191904 238 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm19777-201ENSMUST00000191940 358 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm5322-201ENSMUST00000206142 699 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Usp11Q99K46 Gm24533-201ENSMUST00000083138 196 ntBASIC3.39□□□□□ -1.87
Usp11Q99K46 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Usp11Q99K46 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Usp11Q99K46 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Usp11Q99K46 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
Usp11Q99K46 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Usp11Q99K46 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp11Q99K46 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Usp11Q99K46 Gm26396-201ENSMUST00000104093 132 ntBASIC3.38□□□□□ -1.87
Usp11Q99K46 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.38□□□□□ -1.87
Usp11Q99K46 Gm14622-201ENSMUST00000117117 468 ntBASIC3.38□□□□□ -1.87
Usp11Q99K46 Gm14670-201ENSMUST00000117327 337 ntBASIC3.38□□□□□ -1.87
Usp11Q99K46 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.38□□□□□ -1.87
Usp11Q99K46 Gm11229-201ENSMUST00000121993 437 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms