Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm43115-201ENSMUST00000196244 160 ntBASIC1.26□□□□□ -2.21
Cspg4Q8VHY0 Gm43865-201ENSMUST00000204721 127 ntBASIC1.26□□□□□ -2.21
Cspg4Q8VHY0 Gm45268-201ENSMUST00000210046 370 ntBASIC1.26□□□□□ -2.21
Cspg4Q8VHY0 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.26□□□□□ -2.21
Cspg4Q8VHY0 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm15526-201ENSMUST00000112504 204 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm14366-201ENSMUST00000121970 730 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm22107-201ENSMUST00000122548 100 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm23033-201ENSMUST00000157996 134 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm24770-201ENSMUST00000158505 92 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm24546-201ENSMUST00000158652 102 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm24174-201ENSMUST00000158933 111 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Mir6950-201ENSMUST00000184438 73 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 AC102575.1-201ENSMUST00000225348 547 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Mir196b-201ENSMUST00000083509 85 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm42852-201ENSMUST00000202649 1379 ntBASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
Cspg4Q8VHY0 Gm12386-201ENSMUST00000117380 688 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm23435-201ENSMUST00000157183 156 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm22839-201ENSMUST00000158436 304 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Mir219b-201ENSMUST00000198317 65 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm44061-201ENSMUST00000203962 1195 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm44478-201ENSMUST00000204875 114 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm18855-201ENSMUST00000206689 570 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 AC117588.2-201ENSMUST00000228340 311 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm37061-201ENSMUST00000195066 3243 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm23470-201ENSMUST00000157129 120 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm22563-201ENSMUST00000157333 269 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm23813-201ENSMUST00000175153 77 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
Cspg4Q8VHY0 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm7123-201ENSMUST00000117647 213 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm25198-201ENSMUST00000178574 110 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm27921-201ENSMUST00000183968 108 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 AC173345.3-201ENSMUST00000221245 1093 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm13901-201ENSMUST00000137252 468 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm23558-201ENSMUST00000157823 80 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm27025-201ENSMUST00000182392 942 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm29263-201ENSMUST00000188718 463 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm28384-201ENSMUST00000189079 463 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm36994-201ENSMUST00000192941 492 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm44830-201ENSMUST00000207667 584 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm24252-201ENSMUST00000083700 132 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Gm22353-201ENSMUST00000083918 136 ntBASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Cspg4Q8VHY0 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm25759-201ENSMUST00000103988 129 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm15106-201ENSMUST00000119691 821 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm11357-201ENSMUST00000119758 954 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Mir6379-201ENSMUST00000183392 115 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm3010-201ENSMUST00000198805 448 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm15282-201ENSMUST00000117707 300 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm23249-201ENSMUST00000083369 161 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.22□□□□□ -2.21
Cspg4Q8VHY0 Gm26154-201ENSMUST00000102339 96 ntBASIC1.21□□□□□ -2.22
Cspg4Q8VHY0 Gm12697-201ENSMUST00000118008 667 ntBASIC1.21□□□□□ -2.22
Cspg4Q8VHY0 Gm15275-201ENSMUST00000154752 347 ntBASIC1.21□□□□□ -2.22
Cspg4Q8VHY0 Gm22521-201ENSMUST00000158272 134 ntBASIC1.21□□□□□ -2.22
Cspg4Q8VHY0 Mir6371-201ENSMUST00000184470 111 ntBASIC1.21□□□□□ -2.22
Cspg4Q8VHY0 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.21□□□□□ -2.22
Cspg4Q8VHY0 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC1.21□□□□□ -2.22
Cspg4Q8VHY0 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms