Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Gm14562-201ENSMUST00000129885 543 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm26100-201ENSMUST00000157245 127 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm22851-201ENSMUST00000178741 94 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm25074-201ENSMUST00000178782 94 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Mir6341-201ENSMUST00000183490 121 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm27313-201ENSMUST00000183500 142 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm27374-201ENSMUST00000183660 81 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm27648-201ENSMUST00000184315 107 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm27520-201ENSMUST00000184872 81 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm18551-201ENSMUST00000195594 642 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm44041-201ENSMUST00000203678 396 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm6012-201ENSMUST00000210821 730 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm45814-201ENSMUST00000212646 775 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm8125-201ENSMUST00000216602 738 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
Sh3kbp1Q8R550 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm7916-201ENSMUST00000120325 456 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm14775-201ENSMUST00000122089 310 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm12368-201ENSMUST00000122251 434 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm24627-201ENSMUST00000122764 138 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm22563-201ENSMUST00000157333 269 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm24138-201ENSMUST00000157572 114 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm24901-201ENSMUST00000158125 110 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm17538-201ENSMUST00000168236 327 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Mir3106-201ENSMUST00000175401 82 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm23186-201ENSMUST00000180078 107 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Mir6413-201ENSMUST00000184049 108 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm17946-201ENSMUST00000186856 538 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Gm44754-201ENSMUST00000208155 400 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.39□□□□□ -1.87
Sh3kbp1Q8R550 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm13728-201ENSMUST00000117471 400 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm14918-201ENSMUST00000118153 268 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm11785-201ENSMUST00000120165 601 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm11522-201ENSMUST00000120533 176 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm14581-201ENSMUST00000121726 198 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm15733-201ENSMUST00000132957 242 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm24819-201ENSMUST00000175094 166 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm22631-201ENSMUST00000179656 94 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm21729-201ENSMUST00000180058 664 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm21853-201ENSMUST00000180071 664 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm29495-201ENSMUST00000189319 664 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm35558-203ENSMUST00000222264 204 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 AC154747.1-201ENSMUST00000225265 239 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm9762-201ENSMUST00000036976 444 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm24268-201ENSMUST00000082990 110 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Snord38a-201ENSMUST00000083746 71 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Sh3kbp1Q8R550 Gm45461-201ENSMUST00000211726 4535 ntBASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Gm13541-201ENSMUST00000119519 283 ntBASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Gm11414-201ENSMUST00000121795 263 ntBASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Gm22956-201ENSMUST00000122520 80 ntBASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Gm16289-201ENSMUST00000162079 183 ntBASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Cfap61-214ENSMUST00000167179 183 ntBASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Gm26968-201ENSMUST00000182894 481 ntBASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Sh3kbp1Q8R550 Gm37085-201ENSMUST00000193780 196 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms