Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm22136-201ENSMUST00000158751 268 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm27903-201ENSMUST00000175482 126 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm24418-201ENSMUST00000177597 79 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm20794-201ENSMUST00000177626 628 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm24639-201ENSMUST00000178518 79 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm23076-201ENSMUST00000179082 79 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm25077-201ENSMUST00000179157 79 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm17966-201ENSMUST00000193453 594 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm33354-201ENSMUST00000195448 906 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm19177-201ENSMUST00000204520 613 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm7692-201ENSMUST00000213534 409 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm24765-201ENSMUST00000083691 103 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.62□□□□□ -1.83
CopaQ8CIE6 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CopaQ8CIE6 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm26147-201ENSMUST00000104479 114 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm15399-201ENSMUST00000118055 724 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm14736-201ENSMUST00000121470 336 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm16354-201ENSMUST00000155376 150 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm25653-201ENSMUST00000158473 138 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm23053-201ENSMUST00000175136 96 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm23523-201ENSMUST00000180190 107 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm28090-201ENSMUST00000189458 664 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm20885-201ENSMUST00000190192 654 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm43505-201ENSMUST00000200579 139 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 AC154600.1-201ENSMUST00000226480 714 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Olfr895-201ENSMUST00000093864 951 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CopaQ8CIE6 AC121598.3-201ENSMUST00000227179 1643 ntBASIC3.61□□□□□ -1.83
CopaQ8CIE6 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm26396-201ENSMUST00000104093 132 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm14647-201ENSMUST00000119392 680 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm14687-201ENSMUST00000120206 363 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm14574-201ENSMUST00000120644 279 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm24059-201ENSMUST00000157493 312 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm24780-201ENSMUST00000157635 143 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm8207-201ENSMUST00000171204 502 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm24810-201ENSMUST00000175317 70 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Mir8106-201ENSMUST00000184520 139 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm43083-201ENSMUST00000199594 476 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm18854-201ENSMUST00000211196 329 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Mir193a-201ENSMUST00000083461 66 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm25411-201ENSMUST00000083760 151 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.6□□□□□ -1.83
CopaQ8CIE6 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.6□□□□□ -1.83
CopaQ8CIE6 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm13717-201ENSMUST00000119868 365 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm12897-201ENSMUST00000120341 250 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm12872-201ENSMUST00000121835 320 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm23183-201ENSMUST00000122595 323 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm22380-201ENSMUST00000157479 95 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm37428-201ENSMUST00000193886 137 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm18971-201ENSMUST00000197240 374 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm44041-201ENSMUST00000203678 396 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm45080-201ENSMUST00000206648 283 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 Gm45252-201ENSMUST00000211579 397 ntBASIC3.59□□□□□ -1.83
CopaQ8CIE6 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms