Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm19932-201ENSMUST00000177033 313 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm26335-201ENSMUST00000178449 107 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm20832-201ENSMUST00000189076 665 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Npn2-202ENSMUST00000189275 235 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm17966-201ENSMUST00000193453 594 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm9227-201ENSMUST00000194733 566 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm30638-201ENSMUST00000195570 656 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm36728-201ENSMUST00000195782 665 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm44274-201ENSMUST00000203417 256 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm44909-201ENSMUST00000208756 165 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 AC069561.2-201ENSMUST00000217596 420 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Gm25792-201ENSMUST00000083289 100 ntBASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm23577-201ENSMUST00000103950 110 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm23078-201ENSMUST00000157848 148 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm23895-201ENSMUST00000158108 160 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm24724-201ENSMUST00000158230 107 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm26701-201ENSMUST00000181571 234 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Mir6386-201ENSMUST00000183558 104 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm28661-201ENSMUST00000188231 681 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm28069-201ENSMUST00000189926 214 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm37495-201ENSMUST00000194590 264 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm43521-201ENSMUST00000197838 255 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm43107-201ENSMUST00000198729 255 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm7624-201ENSMUST00000209702 435 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm45400-201ENSMUST00000211603 653 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm18696-201ENSMUST00000220103 274 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Snora23-201ENSMUST00000082517 184 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm24268-201ENSMUST00000082990 110 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Mir132-201ENSMUST00000083603 66 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm23848-201ENSMUST00000083826 106 ntBASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm14558-201ENSMUST00000117458 381 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm23599-201ENSMUST00000157261 251 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm22059-201ENSMUST00000157544 104 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm22769-201ENSMUST00000158367 98 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm22836-201ENSMUST00000158441 61 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Mir5123-201ENSMUST00000177794 83 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm4076-201ENSMUST00000179230 965 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm25156-201ENSMUST00000179809 79 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm23144-201ENSMUST00000180226 107 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm27921-201ENSMUST00000183968 108 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm8747-201ENSMUST00000195392 751 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm19089-201ENSMUST00000197207 613 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm45080-201ENSMUST00000206648 283 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.91□□□□□ -1.94
Ccdc28bQ8CEG5 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms