Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 Gm22740-201ENSMUST00000083439 109 ntBASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Sh3rf3Q8C120 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm23941-201ENSMUST00000101953 107 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm15844-201ENSMUST00000118016 576 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm23960-201ENSMUST00000157206 131 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm27903-201ENSMUST00000175482 126 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm10292-201ENSMUST00000183142 581 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm19427-201ENSMUST00000183619 208 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm21673-201ENSMUST00000186640 436 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm21135-201ENSMUST00000189023 436 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm44583-201ENSMUST00000207478 281 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm19126-201ENSMUST00000207896 509 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm2710-201ENSMUST00000073196 603 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sh3rf3Q8C120 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm24127-201ENSMUST00000104110 130 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm23865-201ENSMUST00000157723 97 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm25520-201ENSMUST00000158389 118 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm24546-201ENSMUST00000158652 102 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm24713-201ENSMUST00000178850 107 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm25448-201ENSMUST00000180065 107 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm27308-201ENSMUST00000184807 233 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm28399-201ENSMUST00000186221 318 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm28572-201ENSMUST00000187444 318 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm29365-201ENSMUST00000189461 699 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm29192-201ENSMUST00000190942 377 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm6105-201ENSMUST00000200580 624 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm35857-201ENSMUST00000212739 178 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Snora23-201ENSMUST00000082517 184 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm23645-201ENSMUST00000083228 108 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm22577-201ENSMUST00000083731 109 ntBASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.79□□□□□ -1.8
Sh3rf3Q8C120 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm12495-201ENSMUST00000119750 447 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm12897-201ENSMUST00000120341 250 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm7327-201ENSMUST00000120925 652 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm14287-201ENSMUST00000121060 117 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm23257-201ENSMUST00000158322 132 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm24577-201ENSMUST00000158580 63 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm22890-201ENSMUST00000158642 144 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm21842-201ENSMUST00000177552 498 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm21626-201ENSMUST00000177791 498 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm21562-201ENSMUST00000177888 498 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm21539-201ENSMUST00000177925 498 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm21599-201ENSMUST00000178249 498 ntBASIC3.78□□□□□ -1.8
Sh3rf3Q8C120 Gm21914-201ENSMUST00000178452 498 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms