Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm24930-201ENSMUST00000158315 83 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm25361-201ENSMUST00000179358 76 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm24518-201ENSMUST00000180275 94 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm27694-201ENSMUST00000184740 86 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Mir6715-201ENSMUST00000184990 57 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm38332-201ENSMUST00000194189 147 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm37575-201ENSMUST00000195467 309 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Trav15n-3-201ENSMUST00000200498 168 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm44083-201ENSMUST00000203114 337 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm44063-201ENSMUST00000203307 376 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm45730-201ENSMUST00000212560 395 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sh3rf2Q8BZT2 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Mir466b-8-201ENSMUST00000103883 86 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm14811-201ENSMUST00000117070 117 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm14101-201ENSMUST00000121502 473 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm23463-201ENSMUST00000122468 99 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm22037-201ENSMUST00000157280 296 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm24784-201ENSMUST00000157640 62 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm23775-201ENSMUST00000158991 249 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm8207-201ENSMUST00000171204 502 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Mir5624-201ENSMUST00000176635 61 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm21726-201ENSMUST00000179654 392 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Mir466e-201ENSMUST00000198862 84 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm42526-201ENSMUST00000198956 393 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Mir466c-1-201ENSMUST00000200654 84 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm19326-201ENSMUST00000219818 326 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Gm24533-201ENSMUST00000083138 196 ntBASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.59□□□□□ -1.83
Sh3rf2Q8BZT2 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.59□□□□□ -1.84
Sh3rf2Q8BZT2 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sh3rf2Q8BZT2 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
Sh3rf2Q8BZT2 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm13314-201ENSMUST00000118742 335 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm12137-201ENSMUST00000119565 346 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm25883-201ENSMUST00000157781 271 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm25606-201ENSMUST00000158363 95 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm24415-201ENSMUST00000180218 107 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Mir6393-201ENSMUST00000183709 94 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm27402-201ENSMUST00000183890 120 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm28163-201ENSMUST00000187099 325 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm6012-201ENSMUST00000210821 730 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Gm18360-201ENSMUST00000173327 1524 ntBASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Sh3rf2Q8BZT2 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Sh3rf2Q8BZT2 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms