Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm29167-201ENSMUST00000190024 377 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm22149-201ENSMUST00000104442 136 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm12383-201ENSMUST00000120628 760 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm23415-201ENSMUST00000175519 83 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm28794-201ENSMUST00000185276 136 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm43897-201ENSMUST00000204019 309 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 CT030238.4-201ENSMUST00000228579 801 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Usp47Q8BY87 Gm23249-201ENSMUST00000083369 161 ntBASIC2.36□□□□□ -2.03
Usp47Q8BY87 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Usp47Q8BY87 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Usp47Q8BY87 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Usp47Q8BY87 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm23431-201ENSMUST00000104006 107 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm22494-201ENSMUST00000104495 128 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm11356-201ENSMUST00000118974 192 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm11429-201ENSMUST00000119089 144 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm24770-201ENSMUST00000158505 92 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm24174-201ENSMUST00000158933 111 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Nron-204ENSMUST00000158971 370 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm24417-201ENSMUST00000178123 79 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm24653-201ENSMUST00000178541 79 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm25934-201ENSMUST00000178642 79 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC2.35□□□□□ -2.03
Usp47Q8BY87 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Usp47Q8BY87 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.35□□□□□ -2.03
Usp47Q8BY87 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.34□□□□□ -2.03
Usp47Q8BY87 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Usp47Q8BY87 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.34□□□□□ -2.03
Usp47Q8BY87 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Usp47Q8BY87 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Usp47Q8BY87 Gm14517-201ENSMUST00000119040 337 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Gm9440-201ENSMUST00000119667 539 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Gm23476-201ENSMUST00000158881 274 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Usp47Q8BY87 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Gm8532-201ENSMUST00000179174 461 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Mir6379-201ENSMUST00000183392 115 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Gm27921-201ENSMUST00000183968 108 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.34□□□□□ -2.04
Usp47Q8BY87 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Usp47Q8BY87 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.34□□□□□ -2.04
Usp47Q8BY87 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm25526-201ENSMUST00000104332 132 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm2288-201ENSMUST00000118560 638 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm11357-201ENSMUST00000119758 954 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Mup-ps12-201ENSMUST00000126217 549 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm22839-201ENSMUST00000158436 304 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm27326-201ENSMUST00000183504 95 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm18340-201ENSMUST00000196342 609 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm43407-201ENSMUST00000199816 317 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm44404-201ENSMUST00000203979 636 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.33□□□□□ -2.04
Usp47Q8BY87 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.33□□□□□ -2.04
Usp47Q8BY87 Gm14882-201ENSMUST00000117216 218 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm22225-201ENSMUST00000157358 278 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm24783-201ENSMUST00000157639 100 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm25888-201ENSMUST00000157778 302 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm7346-201ENSMUST00000169661 476 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm22693-201ENSMUST00000175049 442 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm29299-201ENSMUST00000185609 923 ntBASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Usp47Q8BY87 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms