Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm14804-201ENSMUST00000122322 508 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm23886-201ENSMUST00000122684 313 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm14562-201ENSMUST00000129885 543 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm26277-201ENSMUST00000157097 152 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm25621-201ENSMUST00000157223 114 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm26195-201ENSMUST00000175035 101 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm29597-201ENSMUST00000188035 308 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm28474-201ENSMUST00000188501 315 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm19147-201ENSMUST00000199622 652 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm44399-201ENSMUST00000205043 226 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 AC153529.1-201ENSMUST00000217818 370 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Nup54Q8BTS4 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm25876-201ENSMUST00000104329 119 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm25728-201ENSMUST00000104525 159 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm12814-201ENSMUST00000117091 846 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm14159-201ENSMUST00000119832 451 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm11358-201ENSMUST00000122310 373 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm22225-201ENSMUST00000157358 278 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm23391-201ENSMUST00000157579 104 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm22849-201ENSMUST00000157713 307 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm23352-201ENSMUST00000158428 64 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm17162-201ENSMUST00000168538 473 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm17186-201ENSMUST00000171742 456 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm22716-201ENSMUST00000177596 107 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm24306-201ENSMUST00000180229 79 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm28163-201ENSMUST00000187099 325 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm29553-201ENSMUST00000189692 279 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm44391-201ENSMUST00000198490 93 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm42665-201ENSMUST00000202100 586 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm25755-201ENSMUST00000083396 107 ntBASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Nup54Q8BTS4 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm14445-201ENSMUST00000117051 1484 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm26384-201ENSMUST00000102183 110 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm25168-201ENSMUST00000104189 132 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm23744-201ENSMUST00000104231 149 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm14428-201ENSMUST00000120408 822 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm7327-201ENSMUST00000120925 652 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm25637-201ENSMUST00000157529 107 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm26041-201ENSMUST00000158148 108 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm27786-201ENSMUST00000184337 70 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Mir6916-201ENSMUST00000184514 63 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm28648-201ENSMUST00000190092 343 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm44657-201ENSMUST00000208568 450 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Gm45590-201ENSMUST00000209715 262 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC2.79□□□□□ -1.96
Nup54Q8BTS4 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.79□□□□□ -1.96
Nup54Q8BTS4 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 94.6 ms