Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.51□□□□□ -1.85
Ubfd1Q78JW9 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm24096-201ENSMUST00000103905 110 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm24987-201ENSMUST00000104453 134 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm14681-201ENSMUST00000118047 411 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm13314-201ENSMUST00000118742 335 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm14570-201ENSMUST00000119444 391 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm15223-201ENSMUST00000120989 826 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm22957-201ENSMUST00000122511 123 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 n-R5s216-201ENSMUST00000122755 112 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm22988-201ENSMUST00000122759 144 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm26278-201ENSMUST00000157098 132 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm23326-201ENSMUST00000157419 105 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm27592-201ENSMUST00000157729 126 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm3470-201ENSMUST00000160819 420 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm17919-201ENSMUST00000173344 312 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm25243-201ENSMUST00000174912 207 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm22174-201ENSMUST00000175050 125 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm22692-201ENSMUST00000175055 125 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm27634-201ENSMUST00000175060 126 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm22460-201ENSMUST00000175269 124 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm25535-201ENSMUST00000175364 125 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm24365-201ENSMUST00000175384 125 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm44310-201ENSMUST00000175424 126 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm22639-201ENSMUST00000175591 125 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm24979-201ENSMUST00000178626 126 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm23191-201ENSMUST00000179147 107 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm27743-201ENSMUST00000185136 126 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm28755-201ENSMUST00000185773 199 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm6059-201ENSMUST00000196903 340 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm45860-201ENSMUST00000212700 334 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ubfd1Q78JW9 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm11456-201ENSMUST00000121070 256 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm25835-201ENSMUST00000158917 144 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm23775-201ENSMUST00000158991 249 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm42832-201ENSMUST00000196361 745 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm18982-201ENSMUST00000198118 529 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm43472-201ENSMUST00000200175 154 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 CT485612.2-201ENSMUST00000223014 151 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm25581-201ENSMUST00000083410 164 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Mir101b-201ENSMUST00000083622 97 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Gm25630-201ENSMUST00000084000 162 ntBASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ubfd1Q78JW9 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Mir687-201ENSMUST00000102166 89 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm13228-201ENSMUST00000118937 634 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm14852-201ENSMUST00000120065 647 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm15244-201ENSMUST00000121122 130 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm14562-201ENSMUST00000129885 543 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm25827-201ENSMUST00000157089 107 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm22491-201ENSMUST00000157190 102 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm25220-201ENSMUST00000157546 95 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm24192-201ENSMUST00000157978 145 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm24314-201ENSMUST00000158274 123 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm23024-201ENSMUST00000158770 292 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm23152-201ENSMUST00000175322 116 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Gm27520-201ENSMUST00000184872 81 ntBASIC3.48□□□□□ -1.85
Ubfd1Q78JW9 Mir6715-201ENSMUST00000184990 57 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 139.5 ms