Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Ddx55Q6ZPL9 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm25407-201ENSMUST00000104102 134 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm12294-201ENSMUST00000119723 490 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm22561-201ENSMUST00000157331 84 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm24857-201ENSMUST00000158061 310 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm25438-201ENSMUST00000158281 110 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm7925-201ENSMUST00000166690 401 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm17162-201ENSMUST00000168538 473 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm26195-201ENSMUST00000175035 101 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm21960-201ENSMUST00000181924 452 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm29330-201ENSMUST00000190032 699 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm26446-201ENSMUST00000082455 103 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Gm23650-201ENSMUST00000083355 70 ntBASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm22936-201ENSMUST00000103955 126 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm13873-201ENSMUST00000119208 427 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Defa-ps13-201ENSMUST00000120695 204 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm23169-201ENSMUST00000157157 112 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm23957-201ENSMUST00000157209 90 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm26041-201ENSMUST00000158148 108 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm24225-201ENSMUST00000158825 98 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm7909-201ENSMUST00000182688 614 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm27640-201ENSMUST00000184580 147 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm19498-201ENSMUST00000191128 331 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm37085-201ENSMUST00000193780 196 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm37404-201ENSMUST00000195726 359 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm43238-201ENSMUST00000196463 359 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm18423-201ENSMUST00000205144 1074 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm45772-201ENSMUST00000212961 240 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ddx55Q6ZPL9 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm37761-201ENSMUST00000194989 2098 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm25308-201ENSMUST00000104171 158 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm26387-201ENSMUST00000104238 132 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm26145-201ENSMUST00000104476 127 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm25539-201ENSMUST00000116886 122 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm9059-201ENSMUST00000118319 183 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm15231-201ENSMUST00000119174 447 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm15377-201ENSMUST00000119594 246 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm6265-201ENSMUST00000149263 231 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm25637-201ENSMUST00000157529 107 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm23725-201ENSMUST00000177876 107 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm22910-201ENSMUST00000178568 132 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm28418-201ENSMUST00000186179 423 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm6510-201ENSMUST00000195916 574 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm44468-201ENSMUST00000199516 105 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm43406-201ENSMUST00000200356 334 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm7692-201ENSMUST00000213534 409 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 AC150314.1-201ENSMUST00000214798 238 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm9370-201ENSMUST00000222787 609 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm22974-201ENSMUST00000083301 103 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Mir181a-2-201ENSMUST00000083489 76 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm22577-201ENSMUST00000083731 109 ntBASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ddx55Q6ZPL9 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.03□□□□□ -1.77
Ddx55Q6ZPL9 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ddx55Q6ZPL9 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Ddx55Q6ZPL9 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.02□□□□□ -1.77
Ddx55Q6ZPL9 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.02□□□□□ -1.77
Ddx55Q6ZPL9 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddx55Q6ZPL9 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ddx55Q6ZPL9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms