Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Gm22507-201ENSMUST00000082773 160 ntBASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Gm43663-201ENSMUST00000198643 1505 ntBASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Smarca1Q6PGB8 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm25407-201ENSMUST00000104102 134 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm26423-201ENSMUST00000104277 128 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm25728-201ENSMUST00000104525 159 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Mir466f-3-201ENSMUST00000104788 94 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm14159-201ENSMUST00000119832 451 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm16428-201ENSMUST00000121193 723 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm23886-201ENSMUST00000122684 313 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm24959-201ENSMUST00000157924 146 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm23583-201ENSMUST00000158533 289 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm21729-201ENSMUST00000180058 664 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm21853-201ENSMUST00000180071 664 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm27535-201ENSMUST00000183814 157 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm29495-201ENSMUST00000189319 664 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm38261-201ENSMUST00000192608 316 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm37658-201ENSMUST00000192672 315 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm37119-201ENSMUST00000195691 389 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm43239-201ENSMUST00000200131 201 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Smarca1Q6PGB8 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm2066-201ENSMUST00000118046 389 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm15190-201ENSMUST00000120855 276 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm13424-201ENSMUST00000122301 354 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm26027-201ENSMUST00000122725 268 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm25624-201ENSMUST00000157222 275 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm24518-201ENSMUST00000180275 94 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm8747-201ENSMUST00000195392 751 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm19177-201ENSMUST00000204520 613 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Smarca1Q6PGB8 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm44842-201ENSMUST00000209173 3372 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm25308-201ENSMUST00000104171 158 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm13343-201ENSMUST00000116474 105 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Mir1198-201ENSMUST00000116995 121 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm12191-201ENSMUST00000118307 348 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm9703-201ENSMUST00000119573 343 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm3788-201ENSMUST00000119949 136 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm11522-201ENSMUST00000120533 176 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm13368-201ENSMUST00000122443 430 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm22722-201ENSMUST00000157467 132 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm24211-201ENSMUST00000158264 107 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm22833-201ENSMUST00000158292 132 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Gm24498-201ENSMUST00000158445 102 ntBASIC3.55□□□□□ -1.84
Smarca1Q6PGB8 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms