Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.69□□□□□ -1.82
Ift88Q61371 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ift88Q61371 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ift88Q61371 Gm14390-201ENSMUST00000117505 1695 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ift88Q61371 Gm22496-201ENSMUST00000104493 88 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm15106-201ENSMUST00000119691 821 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm15167-201ENSMUST00000121997 187 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm25105-201ENSMUST00000122477 130 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm13901-201ENSMUST00000137252 468 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm5958-201ENSMUST00000147698 297 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm24961-201ENSMUST00000157918 184 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm24192-201ENSMUST00000157978 145 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm23725-201ENSMUST00000177876 107 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm25175-201ENSMUST00000178712 79 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm29350-201ENSMUST00000189141 541 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.68□□□□□ -1.82
Ift88Q61371 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC3.68□□□□□ -1.82
Ift88Q61371 Gm19244-201ENSMUST00000204340 253 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Ift88Q61371 Gm23096-201ENSMUST00000083447 107 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Mir27a-201ENSMUST00000083510 87 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Gm26111-201ENSMUST00000083969 106 ntBASIC3.68□□□□□ -1.82
Ift88Q61371 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.68□□□□□ -1.82
Ift88Q61371 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Ift88Q61371 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Ift88Q61371 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ift88Q61371 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC3.67□□□□□ -1.82
Ift88Q61371 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Ift88Q61371 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Ift88Q61371 Gm15142-201ENSMUST00000121013 856 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm8840-201ENSMUST00000122454 386 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm23540-201ENSMUST00000157543 164 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.67□□□□□ -1.82
Ift88Q61371 Gm23191-201ENSMUST00000179147 107 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm23862-201ENSMUST00000180342 94 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm10105-201ENSMUST00000184601 270 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Mir7028-201ENSMUST00000185016 64 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm28654-201ENSMUST00000189801 379 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm44336-201ENSMUST00000203696 468 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm44870-201ENSMUST00000207291 357 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 AC164567.2-201ENSMUST00000219363 445 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ift88Q61371 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ift88Q61371 Gm25630-201ENSMUST00000084000 162 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.67□□□□□ -1.82
Ift88Q61371 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Ift88Q61371 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ift88Q61371 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Ift88Q61371 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Ift88Q61371 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ift88Q61371 Mup-ps22-201ENSMUST00000121611 243 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.66□□□□□ -1.82
Ift88Q61371 Gm25827-201ENSMUST00000157089 107 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Gm22038-201ENSMUST00000157277 242 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Gm16569-201ENSMUST00000160526 314 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.66□□□□□ -1.82
Ift88Q61371 Mir6338-201ENSMUST00000183389 109 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.66□□□□□ -1.82
Ift88Q61371 Gm37029-201ENSMUST00000195773 239 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Gm44060-201ENSMUST00000204440 410 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Gm44030-201ENSMUST00000204865 432 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Gm44703-201ENSMUST00000205724 248 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 AC166358.7-201ENSMUST00000221132 108 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 AC125543.5-201ENSMUST00000222799 108 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ift88Q61371 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ift88Q61371 Gm23136-201ENSMUST00000083425 99 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Olfr575-201ENSMUST00000084812 957 ntBASIC3.66□□□□□ -1.82
Ift88Q61371 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Ift88Q61371 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Ift88Q61371 AC124562.2-201ENSMUST00000223888 2313 ntBASIC3.65□□□□□ -1.82
Ift88Q61371 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.65□□□□□ -1.83
Ift88Q61371 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Ift88Q61371 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Ift88Q61371 Gm23422-201ENSMUST00000102000 107 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ift88Q61371 Gm14622-201ENSMUST00000117117 468 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm12025-201ENSMUST00000117768 144 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm14678-201ENSMUST00000121396 482 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.65□□□□□ -1.83
Ift88Q61371 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.65□□□□□ -1.83
Ift88Q61371 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ift88Q61371 Gm26278-201ENSMUST00000157098 132 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm24914-201ENSMUST00000157285 313 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm23755-201ENSMUST00000157578 343 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm27592-201ENSMUST00000157729 126 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm22501-201ENSMUST00000158981 127 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm25243-201ENSMUST00000174912 207 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm22174-201ENSMUST00000175050 125 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm22692-201ENSMUST00000175055 125 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm27634-201ENSMUST00000175060 126 ntBASIC3.65□□□□□ -1.83
Ift88Q61371 Gm22460-201ENSMUST00000175269 124 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms