Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm37428-201ENSMUST00000193886 137 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm37732-201ENSMUST00000194377 316 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm43039-201ENSMUST00000202883 963 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.6□□□□□ -1.83
CtcfQ61164 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CtcfQ61164 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm25079-201ENSMUST00000082529 203 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Snord35b-201ENSMUST00000082833 87 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 Gm22572-201ENSMUST00000082985 105 ntBASIC3.6□□□□□ -1.83
CtcfQ61164 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CtcfQ61164 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CtcfQ61164 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
CtcfQ61164 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CtcfQ61164 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm13331-201ENSMUST00000117500 448 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm14883-201ENSMUST00000120179 157 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm25294-201ENSMUST00000122791 104 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC3.59□□□□□ -1.83
CtcfQ61164 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC3.59□□□□□ -1.83
CtcfQ61164 Gm23332-201ENSMUST00000157424 275 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm25706-201ENSMUST00000157828 247 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm22766-201ENSMUST00000158372 99 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm17538-201ENSMUST00000168236 327 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm20543-201ENSMUST00000174200 726 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.59□□□□□ -1.83
CtcfQ61164 Gm8649-201ENSMUST00000181799 233 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm29330-201ENSMUST00000190032 699 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm28098-201ENSMUST00000191361 699 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm42594-201ENSMUST00000199511 246 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm43976-201ENSMUST00000203637 235 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.59□□□□□ -1.83
CtcfQ61164 Gm44687-201ENSMUST00000204975 235 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm34779-201ENSMUST00000210036 263 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm45438-201ENSMUST00000210242 564 ntBASIC3.59□□□□□ -1.83
CtcfQ61164 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC3.59□□□□□ -1.83
CtcfQ61164 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CtcfQ61164 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CtcfQ61164 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CtcfQ61164 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.59□□□□□ -1.84
CtcfQ61164 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
CtcfQ61164 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CtcfQ61164 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CtcfQ61164 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
CtcfQ61164 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
CtcfQ61164 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm25833-201ENSMUST00000104137 133 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm22656-201ENSMUST00000104199 171 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm14558-201ENSMUST00000117458 381 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm12782-201ENSMUST00000117519 727 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm15268-201ENSMUST00000118845 352 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm13368-201ENSMUST00000122443 430 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm25105-201ENSMUST00000122477 130 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm22101-201ENSMUST00000157928 103 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm24552-201ENSMUST00000158646 103 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm24225-201ENSMUST00000158825 98 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm6374-201ENSMUST00000159051 788 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm23053-201ENSMUST00000175136 96 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm26335-201ENSMUST00000178449 107 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm22631-201ENSMUST00000179656 94 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm27161-201ENSMUST00000183960 562 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm28016-201ENSMUST00000184594 196 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm37081-201ENSMUST00000192034 196 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm37658-201ENSMUST00000192672 315 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm38019-201ENSMUST00000195133 380 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm43239-201ENSMUST00000200131 201 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm42665-201ENSMUST00000202100 586 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm19126-201ENSMUST00000207896 509 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm45344-201ENSMUST00000211610 341 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm4987-201ENSMUST00000078326 408 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm4017-201ENSMUST00000084813 338 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm16261-201ENSMUST00000096813 205 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC3.58□□□□□ -1.84
CtcfQ61164 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.58□□□□□ -1.84
CtcfQ61164 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcfQ61164 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
CtcfQ61164 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CtcfQ61164 Gm13761-201ENSMUST00000117238 807 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm12902-201ENSMUST00000118389 322 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm13804-201ENSMUST00000119552 172 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm14578-201ENSMUST00000122166 391 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm25784-201ENSMUST00000122524 81 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm22532-201ENSMUST00000158822 140 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.57□□□□□ -1.84
CtcfQ61164 Gm24810-201ENSMUST00000175317 70 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm20794-201ENSMUST00000177626 628 ntBASIC3.57□□□□□ -1.84
CtcfQ61164 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms