Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC3.29□□□□□ -1.88
ClpbQ60649 Gm28506-201ENSMUST00000189937 150 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Gm18291-201ENSMUST00000190791 301 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Gm28155-201ENSMUST00000191066 151 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Gm9696-202ENSMUST00000191541 830 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Gm37097-201ENSMUST00000193676 336 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Gm18982-201ENSMUST00000198118 529 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.29□□□□□ -1.88
ClpbQ60649 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ClpbQ60649 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ClpbQ60649 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 Gm3867-201ENSMUST00000086108 279 ntBASIC3.29□□□□□ -1.88
ClpbQ60649 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
ClpbQ60649 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ClpbQ60649 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm12125-201ENSMUST00000117261 736 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm14687-201ENSMUST00000120206 363 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.28□□□□□ -1.88
ClpbQ60649 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm22034-201ENSMUST00000157283 134 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm22225-201ENSMUST00000157358 278 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm23667-201ENSMUST00000157466 120 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm23592-201ENSMUST00000157859 117 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm25835-201ENSMUST00000158917 144 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm26159-201ENSMUST00000158968 104 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm23775-201ENSMUST00000158991 249 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm3104-201ENSMUST00000171004 473 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm25314-201ENSMUST00000178810 79 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm28755-201ENSMUST00000185773 199 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.28□□□□□ -1.88
ClpbQ60649 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm5034-201ENSMUST00000199115 634 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC3.28□□□□□ -1.88
ClpbQ60649 Gm45402-201ENSMUST00000211796 223 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm2710-201ENSMUST00000073196 603 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Mir452-201ENSMUST00000093629 85 ntBASIC3.28□□□□□ -1.88
ClpbQ60649 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
ClpbQ60649 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ClpbQ60649 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ClpbQ60649 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm22590-201ENSMUST00000104247 128 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm23530-201ENSMUST00000104564 137 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm13343-201ENSMUST00000116474 105 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm14811-201ENSMUST00000117070 117 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm15223-201ENSMUST00000120989 826 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.27□□□□□ -1.89
ClpbQ60649 Gm25519-201ENSMUST00000158392 127 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.27□□□□□ -1.89
ClpbQ60649 Gm17186-201ENSMUST00000171742 456 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ClpbQ60649 Gm28030-201ENSMUST00000184987 138 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm28779-201ENSMUST00000189678 323 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
ClpbQ60649 Gm9379-201ENSMUST00000196790 646 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm43083-201ENSMUST00000199594 476 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.27□□□□□ -1.89
ClpbQ60649 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
ClpbQ60649 AC160031.2-201ENSMUST00000218242 274 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Gm10161-201ENSMUST00000091506 204 ntBASIC3.27□□□□□ -1.89
ClpbQ60649 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
ClpbQ60649 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ClpbQ60649 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ClpbQ60649 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ClpbQ60649 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ClpbQ60649 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
ClpbQ60649 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ClpbQ60649 Mir669l-201ENSMUST00000103771 98 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm22038-201ENSMUST00000157277 242 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm22080-201ENSMUST00000157591 106 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm22136-201ENSMUST00000158751 268 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm20450-201ENSMUST00000173652 147 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.26□□□□□ -1.89
ClpbQ60649 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ClpbQ60649 Gm21737-201ENSMUST00000178112 664 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm21815-201ENSMUST00000178213 664 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm20874-201ENSMUST00000178356 663 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm21744-201ENSMUST00000178403 662 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ClpbQ60649 Gm24168-201ENSMUST00000178825 107 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ClpbQ60649 Gm21638-201ENSMUST00000179473 836 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm20901-201ENSMUST00000180177 664 ntBASIC3.26□□□□□ -1.89
ClpbQ60649 Gm23523-201ENSMUST00000180190 107 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms