Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Gm22693-201ENSMUST00000175049 442 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm25642-201ENSMUST00000175137 66 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm27599-201ENSMUST00000183758 174 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm7329-201ENSMUST00000185915 210 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm37098-201ENSMUST00000192290 244 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm44533-201ENSMUST00000207782 268 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm45791-201ENSMUST00000212908 352 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm45263-201ENSMUST00000210377 1375 ntBASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Trav8d-1Q5R1H8 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm14670-201ENSMUST00000117327 337 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm13876-201ENSMUST00000118451 261 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm12235-201ENSMUST00000118596 170 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm11438-201ENSMUST00000121582 189 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Trav20-201ENSMUST00000142754 347 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm24783-201ENSMUST00000157639 100 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm24417-201ENSMUST00000178123 79 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm22264-201ENSMUST00000178200 107 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm24653-201ENSMUST00000178541 79 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm25934-201ENSMUST00000178642 79 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm24968-201ENSMUST00000179817 107 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm27522-201ENSMUST00000183949 230 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm29184-201ENSMUST00000190038 334 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm37576-201ENSMUST00000194228 372 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm43043-201ENSMUST00000196579 412 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm44300-201ENSMUST00000196792 121 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm45252-201ENSMUST00000211579 397 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm25124-201ENSMUST00000083345 164 ntBASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC1.55□□□□□ -2.16
Trav8d-1Q5R1H8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm25485-201ENSMUST00000104120 132 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm14363-201ENSMUST00000122304 409 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm14129-201ENSMUST00000122436 291 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm25368-201ENSMUST00000158847 131 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Mir3473c-201ENSMUST00000175262 81 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm3724-201ENSMUST00000197957 349 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 AC166358.6-201ENSMUST00000221834 1206 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm25402-201ENSMUST00000082966 131 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.54□□□□□ -2.16
Trav8d-1Q5R1H8 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm12640-201ENSMUST00000120097 310 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm22037-201ENSMUST00000157280 296 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm22483-201ENSMUST00000157986 274 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm21827-201ENSMUST00000178247 423 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Mir7050-201ENSMUST00000184636 60 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm28745-201ENSMUST00000190069 305 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm44212-201ENSMUST00000205016 897 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm18453-201ENSMUST00000208000 626 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm19885-201ENSMUST00000212853 343 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 AC153966.1-201ENSMUST00000220106 3764 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm23939-201ENSMUST00000082880 133 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Gm23932-201ENSMUST00000082914 107 ntBASIC1.53□□□□□ -2.16
Trav8d-1Q5R1H8 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Trav8d-1Q5R1H8 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.52□□□□□ -2.17
Trav8d-1Q5R1H8 Gm25090-201ENSMUST00000104000 132 ntBASIC1.52□□□□□ -2.17
Trav8d-1Q5R1H8 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms