Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm43083-201ENSMUST00000199594 476 ntBASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Gm44754-201ENSMUST00000208155 400 ntBASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Gm18645-201ENSMUST00000209593 651 ntBASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Gm19885-201ENSMUST00000212853 343 ntBASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm22270-201ENSMUST00000104034 132 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm15176-201ENSMUST00000117734 135 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 n-R5s216-201ENSMUST00000122755 112 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm24304-201ENSMUST00000177635 107 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm27761-201ENSMUST00000184091 131 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 AC154296.1-201ENSMUST00000198150 67 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm44472-201ENSMUST00000204922 943 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 AC151902.1-201ENSMUST00000227800 375 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm22978-201ENSMUST00000082607 160 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm24698-201ENSMUST00000083883 130 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC1.73□□□□□ -2.13
Trav5d-4Q5R1F6 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm15846-201ENSMUST00000116022 320 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm14918-201ENSMUST00000118153 268 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm14731-201ENSMUST00000119216 376 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm23469-201ENSMUST00000157131 104 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm22037-201ENSMUST00000157280 296 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm23473-201ENSMUST00000158883 116 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm23963-201ENSMUST00000179603 77 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm26960-201ENSMUST00000182263 412 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm43142-201ENSMUST00000198670 361 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm43232-201ENSMUST00000201346 364 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 AC157017.2-201ENSMUST00000218354 777 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Mir93-201ENSMUST00000083593 88 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Gm44708-201ENSMUST00000205580 2237 ntBASIC1.72□□□□□ -2.13
Trav5d-4Q5R1F6 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Mir344e-201ENSMUST00000104677 66 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm15159-201ENSMUST00000117062 764 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm12871-201ENSMUST00000118758 438 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm8217-201ENSMUST00000119136 465 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm14815-201ENSMUST00000120060 488 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm12706-201ENSMUST00000121588 698 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Scgb2b22-ps-201ENSMUST00000121947 340 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm25488-201ENSMUST00000158728 118 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm25368-201ENSMUST00000158847 131 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Mir5101-201ENSMUST00000175181 83 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Mir6917-201ENSMUST00000184111 61 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm3489-201ENSMUST00000190083 528 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm45344-201ENSMUST00000211610 341 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm5596-201ENSMUST00000207988 2421 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.71□□□□□ -2.14
Trav5d-4Q5R1F6 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm24098-201ENSMUST00000102075 109 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm25381-201ENSMUST00000102078 109 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm25094-201ENSMUST00000103992 131 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm23551-201ENSMUST00000116852 121 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm14670-201ENSMUST00000117327 337 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm14566-201ENSMUST00000118915 321 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm16218-201ENSMUST00000155424 388 ntBASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
Trav5d-4Q5R1F6 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms