Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC2.17□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Ccdc88bQ4QRL3 Mir1192-201ENSMUST00000116976 121 ntBASIC2.16□□□□□ -2.06
Ccdc88bQ4QRL3 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.16□□□□□ -2.06
Ccdc88bQ4QRL3 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.16□□□□□ -2.06
Ccdc88bQ4QRL3 Gm25038-201ENSMUST00000082928 130 ntBASIC2.16□□□□□ -2.06
Ccdc88bQ4QRL3 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.16□□□□□ -2.06
Ccdc88bQ4QRL3 Gm3104-201ENSMUST00000171004 473 ntBASIC2.15□□□□□ -2.06
Ccdc88bQ4QRL3 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC2.15□□□□□ -2.06
Ccdc88bQ4QRL3 Gm44559-201ENSMUST00000207177 1012 ntBASIC2.15□□□□□ -2.06
Ccdc88bQ4QRL3 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Ccdc88bQ4QRL3 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Ccdc88bQ4QRL3 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.15□□□□□ -2.07
Ccdc88bQ4QRL3 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Mir466i-201ENSMUST00000116924 121 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm15161-201ENSMUST00000117340 387 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm7164-201ENSMUST00000117503 450 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm17064-201ENSMUST00000167690 452 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm43510-201ENSMUST00000197922 353 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm45268-201ENSMUST00000210046 370 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm42671-201ENSMUST00000198013 1604 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm44266-201ENSMUST00000205235 500 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Gm23623-201ENSMUST00000082461 107 ntBASIC2.14□□□□□ -2.07
Ccdc88bQ4QRL3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr987-203ENSMUST00000216347 1453 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm25506-201ENSMUST00000104339 70 ntBASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm6429-201ENSMUST00000117144 475 ntBASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm2005-201ENSMUST00000120759 542 ntBASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm24942-201ENSMUST00000158328 114 ntBASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm25247-201ENSMUST00000175475 90 ntBASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm19089-201ENSMUST00000197207 613 ntBASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Ccdc88bQ4QRL3 Gm24895-201ENSMUST00000122742 74 ntBASIC2.12□□□□□ -2.07
Ccdc88bQ4QRL3 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Ccdc88bQ4QRL3 Gm44052-201ENSMUST00000203382 396 ntBASIC2.12□□□□□ -2.07
Ccdc88bQ4QRL3 Gm45189-201ENSMUST00000208567 363 ntBASIC2.12□□□□□ -2.07
Ccdc88bQ4QRL3 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC2.12□□□□□ -2.07
Ccdc88bQ4QRL3 Gm23126-201ENSMUST00000104260 134 ntBASIC2.11□□□□□ -2.07
Ccdc88bQ4QRL3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC2.11□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC2.11□□□□□ -2.07
Ccdc88bQ4QRL3 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Ccdc88bQ4QRL3 Gm23435-201ENSMUST00000157183 156 ntBASIC2.1□□□□□ -2.07
Ccdc88bQ4QRL3 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC2.1□□□□□ -2.07
Ccdc88bQ4QRL3 AC079644.1-201ENSMUST00000220586 405 ntBASIC2.1□□□□□ -2.07
Ccdc88bQ4QRL3 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC2.1□□□□□ -2.07
Ccdc88bQ4QRL3 AC107369.1-201ENSMUST00000227373 860 ntBASIC2.1□□□□□ -2.07
Ccdc88bQ4QRL3 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Gm14537-201ENSMUST00000117464 599 ntBASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Gm25966-201ENSMUST00000157169 117 ntBASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Gm43991-201ENSMUST00000203751 274 ntBASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 AC173345.3-201ENSMUST00000221245 1093 ntBASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Ccdc88bQ4QRL3 Gm38104-201ENSMUST00000195121 1895 ntBASIC2.09□□□□□ -2.08
Ccdc88bQ4QRL3 Gm7123-201ENSMUST00000117647 213 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Gm15282-201ENSMUST00000117707 300 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Gm23469-201ENSMUST00000157131 104 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Gm17164-201ENSMUST00000169013 506 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Gm28151-201ENSMUST00000189404 951 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 AC122295.1-201ENSMUST00000223476 388 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Gm10794-201ENSMUST00000099624 207 ntBASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Ccdc88bQ4QRL3 Gm11819-201ENSMUST00000122192 372 ntBASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Gm25166-201ENSMUST00000158909 111 ntBASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Gm22963-201ENSMUST00000157960 91 ntBASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Gm44818-201ENSMUST00000206608 358 ntBASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Gm20948-201ENSMUST00000211091 449 ntBASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.07□□□□□ -2.08
Ccdc88bQ4QRL3 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ccdc88bQ4QRL3 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Ccdc88bQ4QRL3 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.06□□□□□ -2.08
Ccdc88bQ4QRL3 Gm23120-201ENSMUST00000157654 287 ntBASIC2.06□□□□□ -2.08
Ccdc88bQ4QRL3 Mir6540-201ENSMUST00000184886 108 ntBASIC2.06□□□□□ -2.08
Ccdc88bQ4QRL3 Gm37801-201ENSMUST00000194754 274 ntBASIC2.06□□□□□ -2.08
Ccdc88bQ4QRL3 AC156559.1-201ENSMUST00000224158 222 ntBASIC2.06□□□□□ -2.08
Ccdc88bQ4QRL3 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms