Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.38□□□□□ -2.03
Shank3Q4ACU6 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.38□□□□□ -2.03
Shank3Q4ACU6 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.38□□□□□ -2.03
Shank3Q4ACU6 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.38□□□□□ -2.03
Shank3Q4ACU6 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.38□□□□□ -2.03
Shank3Q4ACU6 Gm24871-201ENSMUST00000083099 116 ntBASIC2.38□□□□□ -2.03
Shank3Q4ACU6 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.38□□□□□ -2.03
Shank3Q4ACU6 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.38□□□□□ -2.03
Shank3Q4ACU6 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm25097-201ENSMUST00000104042 145 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm12889-201ENSMUST00000118684 241 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm14898-201ENSMUST00000120202 645 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm12881-201ENSMUST00000121191 203 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm24475-201ENSMUST00000157435 143 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm27715-201ENSMUST00000184714 260 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm19123-201ENSMUST00000190716 651 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm38238-201ENSMUST00000194334 346 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm43675-201ENSMUST00000199468 1184 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm44348-201ENSMUST00000200165 122 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm6112-201ENSMUST00000208037 629 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm22543-201ENSMUST00000104347 94 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm14591-201ENSMUST00000120407 518 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm3851-201ENSMUST00000168653 318 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm3010-201ENSMUST00000198805 448 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm44615-201ENSMUST00000206548 358 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm44554-201ENSMUST00000208738 147 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm22245-201ENSMUST00000082479 103 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm26437-201ENSMUST00000082595 105 ntBASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Shank3Q4ACU6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm43142-201ENSMUST00000198670 361 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm19233-201ENSMUST00000219772 936 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Shank3Q4ACU6 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm24624-201ENSMUST00000082617 164 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm23102-201ENSMUST00000083724 116 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm42701-201ENSMUST00000196117 1657 ntBASIC2.36□□□□□ -2.03
Shank3Q4ACU6 Gm24984-201ENSMUST00000104454 133 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm14882-201ENSMUST00000117216 218 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm14020-201ENSMUST00000118165 662 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm13676-201ENSMUST00000122185 591 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm24863-201ENSMUST00000179499 107 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm27245-201ENSMUST00000184385 376 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm28745-201ENSMUST00000190069 305 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm37054-201ENSMUST00000193481 543 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Shank3Q4ACU6 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 AC121114.1-201ENSMUST00000228522 570 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Gm23455-201ENSMUST00000083331 100 ntBASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Shank3Q4ACU6 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Gm4732-201ENSMUST00000118778 473 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Gm11356-201ENSMUST00000118974 192 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Lce6a-201ENSMUST00000138403 795 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Mir7052-201ENSMUST00000184821 65 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Gm28438-201ENSMUST00000188299 345 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Gm10297-201ENSMUST00000207136 651 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Gm6012-201ENSMUST00000210821 730 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.34□□□□□ -2.03
Shank3Q4ACU6 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Shank3Q4ACU6 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Gm23431-201ENSMUST00000104006 107 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Gm12509-201ENSMUST00000118033 609 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 149.8 ms