Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm14362-201ENSMUST00000121679 273 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm23791-201ENSMUST00000122553 293 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm12238-201ENSMUST00000127764 124 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm15254-201ENSMUST00000149567 273 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm26101-201ENSMUST00000157246 105 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm24008-201ENSMUST00000157733 138 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm24745-201ENSMUST00000157840 85 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm24464-201ENSMUST00000179697 107 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm27374-201ENSMUST00000183660 81 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm27957-201ENSMUST00000184054 127 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm6060-201ENSMUST00000188671 251 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm28404-201ENSMUST00000190242 453 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm32340-201ENSMUST00000192883 259 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm18403-201ENSMUST00000192907 529 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm43746-201ENSMUST00000200028 317 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm43487-201ENSMUST00000200331 1031 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm44084-201ENSMUST00000203947 409 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm44818-201ENSMUST00000206608 358 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 CT010505.1-201ENSMUST00000227026 396 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.74□□□□□ -1.97
Trim40Q3UWA4 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm22676-201ENSMUST00000116972 129 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm13804-201ENSMUST00000119552 172 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm11384-201ENSMUST00000121376 303 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm22380-201ENSMUST00000157479 95 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm24505-201ENSMUST00000157682 126 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm8338-201ENSMUST00000163928 363 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Mir5112-201ENSMUST00000174897 60 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm24757-201ENSMUST00000176987 371 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm25361-201ENSMUST00000179358 76 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm11395-201ENSMUST00000181011 499 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm27700-201ENSMUST00000185003 81 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm28343-201ENSMUST00000185386 112 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm28299-201ENSMUST00000189908 339 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm37869-201ENSMUST00000193385 595 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm44476-201ENSMUST00000196225 91 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm44961-201ENSMUST00000207450 196 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm45420-201ENSMUST00000211243 425 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm7422-201ENSMUST00000220115 640 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm18113-201ENSMUST00000220630 303 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 AC112972.1-201ENSMUST00000227329 365 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Trim40Q3UWA4 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Mir499-201ENSMUST00000102357 79 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Mup-ps17-201ENSMUST00000120723 218 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm12876-201ENSMUST00000120975 408 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm22755-201ENSMUST00000157143 100 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm22563-201ENSMUST00000157333 269 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm16289-201ENSMUST00000162079 183 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Mir5123-201ENSMUST00000177794 83 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm23144-201ENSMUST00000180226 107 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm28647-201ENSMUST00000188416 197 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm19193-201ENSMUST00000190263 590 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm38053-201ENSMUST00000193938 160 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm29848-201ENSMUST00000203107 295 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm44128-201ENSMUST00000204909 219 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm44657-201ENSMUST00000208568 450 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 AC120553.1-201ENSMUST00000227313 260 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Gm23925-201ENSMUST00000082471 132 ntBASIC2.72□□□□□ -1.97
Trim40Q3UWA4 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms