Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm25939-201ENSMUST00000179876 191 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm26622-201ENSMUST00000180520 298 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm7675-201ENSMUST00000208828 686 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm32300-201ENSMUST00000221735 515 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm10038-201ENSMUST00000077233 441 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm9174-201ENSMUST00000078149 255 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm23444-201ENSMUST00000082922 191 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm25792-201ENSMUST00000083289 100 ntBASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Upf3aQ3ULJ3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm14794-201ENSMUST00000118181 192 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Mup-ps14-201ENSMUST00000118437 532 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm12016-201ENSMUST00000119079 681 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm9440-201ENSMUST00000119667 539 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm13627-201ENSMUST00000119700 706 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm13433-201ENSMUST00000121701 240 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm13424-201ENSMUST00000122301 354 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Mup-ps2-201ENSMUST00000142602 533 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm22390-201ENSMUST00000157588 325 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm25334-201ENSMUST00000158036 110 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm3852-201ENSMUST00000182781 264 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm27582-201ENSMUST00000184084 126 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm37377-201ENSMUST00000191733 304 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm38311-201ENSMUST00000192945 165 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 AC091260.1-201ENSMUST00000216112 229 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 AC154252.1-201ENSMUST00000226041 473 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Gm6030-201ENSMUST00000078768 402 ntBASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Upf3aQ3ULJ3 Olfr1457-204ENSMUST00000215229 2538 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm13085-201ENSMUST00000118356 171 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm11285-201ENSMUST00000118443 322 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm12935-201ENSMUST00000119352 246 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm14841-201ENSMUST00000121067 758 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm13862-201ENSMUST00000121220 197 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm12155-201ENSMUST00000121267 160 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm12617-201ENSMUST00000121268 381 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm23599-201ENSMUST00000157261 251 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm25666-201ENSMUST00000157702 107 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm17085-201ENSMUST00000165425 502 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm25820-202ENSMUST00000197479 128 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm43004-201ENSMUST00000201872 703 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm43600-201ENSMUST00000202134 223 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm44903-201ENSMUST00000206840 130 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm9377-201ENSMUST00000207227 623 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm18617-201ENSMUST00000222311 259 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Gm25008-201ENSMUST00000083809 81 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Upf3aQ3ULJ3 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm13454-201ENSMUST00000118166 483 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm12871-201ENSMUST00000118758 438 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm12706-201ENSMUST00000121588 698 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 n-R5s192-201ENSMUST00000122577 119 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm22517-201ENSMUST00000158265 136 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm22257-201ENSMUST00000158687 301 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm23005-201ENSMUST00000158950 136 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.53□□□□□ -2
Upf3aQ3ULJ3 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC2.53□□□□□ -2
Upf3aQ3ULJ3 Gm26960-201ENSMUST00000182263 412 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms