Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm10088-201ENSMUST00000074116 423 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 n-R5s37-201ENSMUST00000082533 118 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm26206-201ENSMUST00000082908 110 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Gm38706-201ENSMUST00000182397 2617 ntBASIC2.7□□□□□ -1.98
Trafd1Q3UDK1 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm24122-201ENSMUST00000104107 132 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Mir1195-201ENSMUST00000116818 98 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm14751-201ENSMUST00000117693 222 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm12225-201ENSMUST00000117995 298 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm22651-201ENSMUST00000157872 94 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm8338-201ENSMUST00000163928 363 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm17183-201ENSMUST00000171170 493 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm24082-201ENSMUST00000175175 83 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm24315-201ENSMUST00000177835 127 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm27505-201ENSMUST00000185071 110 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm7837-201ENSMUST00000190873 412 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm44526-201ENSMUST00000204664 121 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm45232-201ENSMUST00000207811 162 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm18703-201ENSMUST00000215318 333 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm18346-201ENSMUST00000216782 325 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm17890-201ENSMUST00000221419 757 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Gm46994-201ENSMUST00000221523 219 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 AC102291.2-201ENSMUST00000228083 367 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.69□□□□□ -1.98
Trafd1Q3UDK1 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm25876-201ENSMUST00000104329 119 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm12640-201ENSMUST00000120097 310 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm13356-201ENSMUST00000121678 335 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 n-R5s207-201ENSMUST00000122497 118 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm14562-201ENSMUST00000129885 543 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm24100-201ENSMUST00000178592 79 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm24137-201ENSMUST00000180055 79 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm22391-201ENSMUST00000180356 79 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm36984-201ENSMUST00000192770 235 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm6615-201ENSMUST00000199426 631 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm19649-201ENSMUST00000201126 822 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm44966-201ENSMUST00000208096 157 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm7751-201ENSMUST00000212868 709 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 AC134334.1-201ENSMUST00000214277 255 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm5955-201ENSMUST00000222712 219 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 AC124569.4-201ENSMUST00000223830 1220 ntBASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
Trafd1Q3UDK1 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm45262-201ENSMUST00000209917 1463 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm26341-201ENSMUST00000104561 134 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm14292-201ENSMUST00000118761 456 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm12213-201ENSMUST00000119924 353 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm15112-201ENSMUST00000120152 860 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm11430-201ENSMUST00000121317 217 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm13210-201ENSMUST00000121483 273 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm15065-201ENSMUST00000121699 273 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm14129-201ENSMUST00000122436 291 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Mir3066-201ENSMUST00000175296 83 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm23415-201ENSMUST00000175519 83 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm25670-201ENSMUST00000178423 107 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm26239-201ENSMUST00000178842 107 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm25156-201ENSMUST00000179809 79 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm24267-201ENSMUST00000179841 107 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm23379-201ENSMUST00000180026 107 ntBASIC2.67□□□□□ -1.98
Trafd1Q3UDK1 Gm28597-201ENSMUST00000187664 666 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms