Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm14600-201ENSMUST00000121032 630 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm14848-201ENSMUST00000121850 467 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm14129-201ENSMUST00000122436 291 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Trav5n-3-201ENSMUST00000164511 270 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm20698-201ENSMUST00000175657 233 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm7329-201ENSMUST00000185915 210 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm37533-201ENSMUST00000193848 545 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm19089-201ENSMUST00000197207 613 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Gm25126-201ENSMUST00000083343 102 ntBASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trim43aQ3TL54 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trim43aQ3TL54 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm25313-201ENSMUST00000101817 116 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm26015-201ENSMUST00000104402 125 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm13806-201ENSMUST00000117822 325 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm24552-201ENSMUST00000158646 103 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm23287-201ENSMUST00000179427 116 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm23143-201ENSMUST00000180137 116 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm27599-201ENSMUST00000183758 174 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm27959-201ENSMUST00000185172 111 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm44137-201ENSMUST00000203670 367 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm19252-201ENSMUST00000204705 305 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm45530-201ENSMUST00000211658 225 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm24871-201ENSMUST00000083099 116 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Mir137-201ENSMUST00000083635 73 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm21286-201ENSMUST00000098035 545 ntBASIC2.29□□□□□ -2.04
Trim43aQ3TL54 Gm22270-201ENSMUST00000104034 132 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm14554-201ENSMUST00000119548 661 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm13751-201ENSMUST00000120280 752 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Snrpert-201ENSMUST00000121967 279 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm23463-201ENSMUST00000122468 99 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm25392-201ENSMUST00000157335 297 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm24857-201ENSMUST00000158061 310 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm27520-201ENSMUST00000184872 81 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm43193-201ENSMUST00000197732 441 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm43228-201ENSMUST00000200735 264 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.28□□□□□ -2.04
Trim43aQ3TL54 CT030187.1-201ENSMUST00000220605 252 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trim43aQ3TL54 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Gm25403-201ENSMUST00000082971 143 ntBASIC2.28□□□□□ -2.04
Trim43aQ3TL54 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm22227-201ENSMUST00000157356 259 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm23473-201ENSMUST00000158883 116 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm16584-201ENSMUST00000159267 189 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm28439-201ENSMUST00000187714 876 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm6059-201ENSMUST00000196903 340 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm43587-201ENSMUST00000199590 204 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm45614-201ENSMUST00000209994 721 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.27□□□□□ -2.05
Trim43aQ3TL54 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Gm15159-201ENSMUST00000117062 764 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Gm13876-201ENSMUST00000118451 261 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Gm14566-201ENSMUST00000118915 321 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Gm11556-201ENSMUST00000120751 288 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Gm22339-201ENSMUST00000157718 62 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.26□□□□□ -2.05
Trim43aQ3TL54 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 1022.6 ms