Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm26059-201ENSMUST00000177865 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22255-201ENSMUST00000177933 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25146-201ENSMUST00000177976 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25523-201ENSMUST00000178044 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24585-201ENSMUST00000178104 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22627-201ENSMUST00000178127 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22912-201ENSMUST00000178242 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24866-201ENSMUST00000178338 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22524-201ENSMUST00000178357 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25710-201ENSMUST00000178367 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm23575-201ENSMUST00000178406 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24872-201ENSMUST00000178434 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22449-201ENSMUST00000178924 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24702-201ENSMUST00000178965 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24206-201ENSMUST00000179011 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24528-201ENSMUST00000179164 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm22909-201ENSMUST00000179190 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm26334-201ENSMUST00000179403 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25463-201ENSMUST00000179405 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25742-201ENSMUST00000179530 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25209-201ENSMUST00000179576 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm26392-201ENSMUST00000179661 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25230-201ENSMUST00000179740 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm26434-201ENSMUST00000179778 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm25741-201ENSMUST00000179825 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24759-201ENSMUST00000179827 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm24219-201ENSMUST00000179861 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Mir3969-201ENSMUST00000197106 92 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm45116-201ENSMUST00000207392 275 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Gm23254-201ENSMUST00000097244 79 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.11□□□□□ -1.59
Col9a1Q05722 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Col9a1Q05722 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Col9a1Q05722 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm37248-201ENSMUST00000193576 3174 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Col9a1Q05722 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
Col9a1Q05722 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm12379-201ENSMUST00000119607 391 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm9218-201ENSMUST00000121068 2694 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm14732-201ENSMUST00000121372 545 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 n-R5s150-201ENSMUST00000122705 108 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm29668-201ENSMUST00000187802 315 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm9251-201ENSMUST00000197202 628 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm44049-201ENSMUST00000204905 2984 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm3086-202ENSMUST00000221248 310 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm24948-201ENSMUST00000082866 207 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm23508-201ENSMUST00000083079 72 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm24453-201ENSMUST00000083346 76 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col9a1Q05722 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Col9a1Q05722 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.1□□□□□ -1.59
Col9a1Q05722 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.1□□□□□ -1.59
Col9a1Q05722 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col9a1Q05722 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col9a1Q05722 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm22004-201ENSMUST00000101884 107 ntBASIC5.09□□□□□ -1.59
Col9a1Q05722 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm24735-201ENSMUST00000158859 118 ntBASIC5.09□□□□□ -1.59
Col9a1Q05722 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm28500-201ENSMUST00000190286 151 ntBASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm43444-201ENSMUST00000198123 291 ntBASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm43993-201ENSMUST00000203972 247 ntBASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.09□□□□□ -1.59
Col9a1Q05722 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col9a1Q05722 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.09□□□□□ -1.59
Col9a1Q05722 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.09□□□□□ -1.59
Col9a1Q05722 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms