Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC3.27□□□□□ -1.89
CiitaP79621 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Gm15399-201ENSMUST00000118055 724 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Gm8880-201ENSMUST00000121800 454 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.27□□□□□ -1.89
CiitaP79621 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.27□□□□□ -1.89
CiitaP79621 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CiitaP79621 Gm25361-201ENSMUST00000179358 76 ntBASIC3.27□□□□□ -1.89
CiitaP79621 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CiitaP79621 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Gm44393-201ENSMUST00000197418 138 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Gm44961-201ENSMUST00000207450 196 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Gm45101-201ENSMUST00000208327 232 ntBASIC3.27□□□□□ -1.89
CiitaP79621 AC155923.1-201ENSMUST00000215676 356 ntBASIC3.27□□□□□ -1.89
CiitaP79621 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.27□□□□□ -1.89
CiitaP79621 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.27□□□□□ -1.89
CiitaP79621 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CiitaP79621 Gm22974-201ENSMUST00000083301 103 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CiitaP79621 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.27□□□□□ -1.89
CiitaP79621 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CiitaP79621 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CiitaP79621 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CiitaP79621 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CiitaP79621 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CiitaP79621 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CiitaP79621 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CiitaP79621 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CiitaP79621 Gm25168-201ENSMUST00000104189 132 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Gm11356-201ENSMUST00000118974 192 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Gm11598-201ENSMUST00000119257 357 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CiitaP79621 Gm23668-201ENSMUST00000157465 111 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Mir5123-201ENSMUST00000177794 83 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Gm11392-201ENSMUST00000181419 710 ntBASIC3.26□□□□□ -1.89
CiitaP79621 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.26□□□□□ -1.89
CiitaP79621 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CiitaP79621 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.26□□□□□ -1.89
CiitaP79621 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Gm10088-201ENSMUST00000074116 423 ntBASIC3.26□□□□□ -1.89
CiitaP79621 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
CiitaP79621 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CiitaP79621 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CiitaP79621 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CiitaP79621 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CiitaP79621 Gm13614-201ENSMUST00000117306 503 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm22718-201ENSMUST00000122701 315 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm23212-201ENSMUST00000122718 60 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC3.25□□□□□ -1.89
CiitaP79621 Gm23981-201ENSMUST00000157136 106 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm26393-201ENSMUST00000157625 129 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC3.25□□□□□ -1.89
CiitaP79621 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.25□□□□□ -1.89
CiitaP79621 Gm24086-201ENSMUST00000175171 98 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm27028-201ENSMUST00000182303 399 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm29073-201ENSMUST00000185563 664 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm28755-201ENSMUST00000185773 199 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm7329-201ENSMUST00000185915 210 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm29165-201ENSMUST00000190655 664 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm29211-201ENSMUST00000191470 664 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CiitaP79621 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.25□□□□□ -1.89
CiitaP79621 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CiitaP79621 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.25□□□□□ -1.89
CiitaP79621 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CiitaP79621 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
CiitaP79621 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CiitaP79621 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
CiitaP79621 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm26504-201ENSMUST00000102033 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Mir693-201ENSMUST00000102187 89 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
CiitaP79621 Gm23911-201ENSMUST00000104596 134 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm13343-201ENSMUST00000116474 105 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm14417-201ENSMUST00000120036 1074 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm15223-201ENSMUST00000120989 826 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm14049-201ENSMUST00000121009 636 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm25052-201ENSMUST00000122661 158 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC3.24□□□□□ -1.89
CiitaP79621 Gm24439-201ENSMUST00000157894 117 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CiitaP79621 Gm8207-201ENSMUST00000171204 502 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
CiitaP79621 Gm26502-201ENSMUST00000177732 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm25350-201ENSMUST00000177849 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm23446-201ENSMUST00000177977 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.24□□□□□ -1.89
CiitaP79621 Gm26201-201ENSMUST00000178047 94 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms