Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Gm24914-201ENSMUST00000157285 313 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm24138-201ENSMUST00000157572 114 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm24959-201ENSMUST00000157924 146 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm16289-201ENSMUST00000162079 183 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm23144-201ENSMUST00000180226 107 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm11395-201ENSMUST00000181011 499 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm21673-201ENSMUST00000186640 436 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.82□□□□□ -1.8
Ercc3P49135 Gm21135-201ENSMUST00000189023 436 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Trbv24-201ENSMUST00000194614 347 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC3.82□□□□□ -1.8
Ercc3P49135 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ercc3P49135 Gm44910-201ENSMUST00000208451 396 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 CT025689.4-201ENSMUST00000225926 601 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ercc3P49135 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ercc3P49135 Gm23097-201ENSMUST00000083448 105 ntBASIC3.82□□□□□ -1.8
Ercc3P49135 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ercc3P49135 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Ercc3P49135 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Ercc3P49135 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Ercc3P49135 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm22023-201ENSMUST00000104354 130 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm15443-201ENSMUST00000118947 820 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm11849-201ENSMUST00000121293 261 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm14765-201ENSMUST00000121954 326 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm26275-201ENSMUST00000157101 268 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm24086-201ENSMUST00000175171 98 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm22631-201ENSMUST00000179656 94 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm27783-201ENSMUST00000183534 105 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm27957-201ENSMUST00000184054 127 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm27648-201ENSMUST00000184315 107 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm27893-201ENSMUST00000184408 194 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Mir8106-201ENSMUST00000184520 139 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.81□□□□□ -1.8
Ercc3P49135 Gm37869-201ENSMUST00000193385 595 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm43550-201ENSMUST00000200597 303 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.81□□□□□ -1.8
Ercc3P49135 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ercc3P49135 Gm44011-201ENSMUST00000203336 394 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm44030-201ENSMUST00000204865 432 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm8125-201ENSMUST00000216602 738 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 CT030247.1-201ENSMUST00000216810 267 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 CT009604.2-201ENSMUST00000225531 377 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ercc3P49135 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ercc3P49135 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ercc3P49135 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ercc3P49135 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ercc3P49135 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
Ercc3P49135 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.81□□□□□ -1.8
Ercc3P49135 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ercc3P49135 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Ercc3P49135 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ercc3P49135 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ercc3P49135 Gm13510-201ENSMUST00000118659 429 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm13424-201ENSMUST00000122301 354 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm22563-201ENSMUST00000157333 269 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.8□□□□□ -1.8
Ercc3P49135 Gm27374-201ENSMUST00000183660 81 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Mir6993-201ENSMUST00000184912 65 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.8□□□□□ -1.8
Ercc3P49135 Gm42622-201ENSMUST00000197229 355 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm43708-201ENSMUST00000198857 961 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm2676-201ENSMUST00000207279 606 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm44600-201ENSMUST00000208540 111 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm45772-201ENSMUST00000212961 240 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm19563-201ENSMUST00000222031 270 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm35558-203ENSMUST00000222264 204 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm24268-201ENSMUST00000082990 110 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 P2ry10-202ENSMUST00000118666 2757 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ercc3P49135 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.8□□□□□ -1.8
Ercc3P49135 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 Gm26423-201ENSMUST00000104277 128 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ercc3P49135 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ercc3P49135 Gm19193-201ENSMUST00000190263 590 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 Gm45105-201ENSMUST00000207824 397 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.79□□□□□ -1.8
Ercc3P49135 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 AC109214.2-201ENSMUST00000220089 358 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.79□□□□□ -1.8
Ercc3P49135 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ercc3P49135 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ercc3P49135 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms