Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm24415-201ENSMUST00000180218 107 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rfx1P48377 Gm27521-201ENSMUST00000184022 64 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Mir6926-201ENSMUST00000184562 68 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm4734-201ENSMUST00000200117 777 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.98□□□□□ -1.61
Rfx1P48377 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Rfx1P48377 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC4.98□□□□□ -1.61
Rfx1P48377 Gm23041-201ENSMUST00000083868 106 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm10222-201ENSMUST00000088336 294 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.98□□□□□ -1.61
Rfx1P48377 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Rfx1P48377 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.98□□□□□ -1.61
Rfx1P48377 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Rfx1P48377 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rfx1P48377 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rfx1P48377 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rfx1P48377 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Rfx1P48377 AC154634.4-201ENSMUST00000226077 2665 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rfx1P48377 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm23956-201ENSMUST00000157211 119 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm25220-201ENSMUST00000157546 95 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm27579-201ENSMUST00000158113 63 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm6374-201ENSMUST00000159051 788 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Rfx1P48377 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC4.97□□□□□ -1.61
Rfx1P48377 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Rfx1P48377 Gm22114-201ENSMUST00000177756 107 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm27997-201ENSMUST00000184942 69 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm18357-201ENSMUST00000188184 580 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Trav5d-2-201ENSMUST00000196107 275 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Trav5n-2-201ENSMUST00000197136 275 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm43415-201ENSMUST00000201934 750 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.97□□□□□ -1.61
Rfx1P48377 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Gm25257-201ENSMUST00000083907 110 ntBASIC4.97□□□□□ -1.61
Rfx1P48377 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Rfx1P48377 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.61
Rfx1P48377 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Rfx1P48377 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Rfx1P48377 Gm13149-201ENSMUST00000122071 339 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm25278-201ENSMUST00000157267 120 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm22113-201ENSMUST00000158343 104 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm25902-201ENSMUST00000158493 318 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Mir6943-201ENSMUST00000185186 66 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm43524-201ENSMUST00000197278 298 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Mir5121-201ENSMUST00000198528 74 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm35931-201ENSMUST00000203931 448 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 AC158606.1-201ENSMUST00000220078 325 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm7422-201ENSMUST00000220115 640 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm24042-201ENSMUST00000083114 103 ntBASIC4.96□□□□□ -1.62
Rfx1P48377 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Rfx1P48377 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Rfx1P48377 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Rfx1P48377 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
Rfx1P48377 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Rfx1P48377 Gm42681-201ENSMUST00000197999 1611 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rfx1P48377 Gm24117-201ENSMUST00000103973 133 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm15526-201ENSMUST00000112504 204 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm15213-201ENSMUST00000122098 216 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm25162-201ENSMUST00000158906 159 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm21816-201ENSMUST00000179255 360 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm26585-201ENSMUST00000180890 630 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm21960-201ENSMUST00000181924 452 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rfx1P48377 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.95□□□□□ -1.62
Rfx1P48377 Gm22806-201ENSMUST00000082738 136 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Gm22353-201ENSMUST00000083918 136 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.95□□□□□ -1.62
Rfx1P48377 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rfx1P48377 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rfx1P48377 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Rfx1P48377 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rfx1P48377 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Rfx1P48377 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rfx1P48377 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rfx1P48377 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rfx1P48377 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rfx1P48377 Gm25537-201ENSMUST00000103851 109 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm24578-201ENSMUST00000103970 129 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Mir875-201ENSMUST00000104698 78 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm14774-201ENSMUST00000117857 536 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm14792-201ENSMUST00000119725 258 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm14551-201ENSMUST00000120802 256 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm22314-201ENSMUST00000158007 281 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm24885-201ENSMUST00000158783 270 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Rfx1P48377 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.94□□□□□ -1.62
Rfx1P48377 Gm27694-201ENSMUST00000184740 86 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.94□□□□□ -1.62
Rfx1P48377 AC122225.1-201ENSMUST00000215641 369 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm5175-202ENSMUST00000219699 529 ntBASIC4.94□□□□□ -1.62
Rfx1P48377 Gm19786-201ENSMUST00000222589 580 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms