Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm29658-201ENSMUST00000185404 230 ntBASIC1.24□□□□□ -2.21
HttP42859 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC1.24□□□□□ -2.21
HttP42859 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.24□□□□□ -2.21
HttP42859 Gm23040-201ENSMUST00000083869 163 ntBASIC1.24□□□□□ -2.21
HttP42859 Gm37311-201ENSMUST00000195541 2024 ntBASIC1.23□□□□□ -2.21
HttP42859 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC1.23□□□□□ -2.21
HttP42859 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC1.23□□□□□ -2.21
HttP42859 Gm24546-201ENSMUST00000158652 102 ntBASIC1.23□□□□□ -2.21
HttP42859 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.23□□□□□ -2.21
HttP42859 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC1.23□□□□□ -2.21
HttP42859 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC1.23□□□□□ -2.21
HttP42859 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC1.23□□□□□ -2.21
HttP42859 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
HttP42859 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
HttP42859 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC1.23□□□□□ -2.21
HttP42859 Gm25847-201ENSMUST00000116793 96 ntBASIC1.23□□□□□ -2.21
HttP42859 Gm13743-201ENSMUST00000121486 724 ntBASIC1.23□□□□□ -2.21
HttP42859 Gm22668-201ENSMUST00000158716 260 ntBASIC1.23□□□□□ -2.21
HttP42859 Gm29600-201ENSMUST00000188687 377 ntBASIC1.23□□□□□ -2.21
HttP42859 Gm37987-201ENSMUST00000194999 825 ntBASIC1.23□□□□□ -2.21
HttP42859 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC1.23□□□□□ -2.21
HttP42859 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC1.23□□□□□ -2.21
HttP42859 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.23□□□□□ -2.21
HttP42859 Gm14128-201ENSMUST00000119514 1011 ntBASIC1.22□□□□□ -2.21
HttP42859 Gm12309-201ENSMUST00000119889 182 ntBASIC1.22□□□□□ -2.21
HttP42859 Gm15116-201ENSMUST00000122248 663 ntBASIC1.22□□□□□ -2.21
HttP42859 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.22□□□□□ -2.21
HttP42859 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.22□□□□□ -2.21
HttP42859 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
HttP42859 Gm8207-201ENSMUST00000171204 502 ntBASIC1.22□□□□□ -2.21
HttP42859 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HttP42859 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
HttP42859 Gm28058-201ENSMUST00000186421 264 ntBASIC1.22□□□□□ -2.21
HttP42859 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC1.22□□□□□ -2.21
HttP42859 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC1.22□□□□□ -2.21
HttP42859 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
HttP42859 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
HttP42859 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC1.22□□□□□ -2.21
HttP42859 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
HttP42859 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.22□□□□□ -2.21
HttP42859 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
HttP42859 Gm23994-201ENSMUST00000158059 88 ntBASIC1.22□□□□□ -2.21
HttP42859 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
HttP42859 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.22□□□□□ -2.21
HttP42859 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC1.22□□□□□ -2.21
HttP42859 AC154270.1-201ENSMUST00000227226 426 ntBASIC1.22□□□□□ -2.21
HttP42859 Gm25658-201ENSMUST00000158472 128 ntBASIC1.21□□□□□ -2.22
HttP42859 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC1.21□□□□□ -2.22
HttP42859 Mir6381-201ENSMUST00000183426 87 ntBASIC1.21□□□□□ -2.22
HttP42859 Gm28552-201ENSMUST00000190725 388 ntBASIC1.21□□□□□ -2.22
HttP42859 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC1.21□□□□□ -2.22
HttP42859 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.21□□□□□ -2.22
HttP42859 Mir211-201ENSMUST00000083651 106 ntBASIC1.21□□□□□ -2.22
HttP42859 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.21□□□□□ -2.22
HttP42859 Gm26358-201ENSMUST00000158215 97 ntBASIC1.21□□□□□ -2.22
HttP42859 Gm17065-201ENSMUST00000165245 239 ntBASIC1.21□□□□□ -2.22
HttP42859 Gm42623-201ENSMUST00000197225 379 ntBASIC1.21□□□□□ -2.22
HttP42859 Gm45375-201ENSMUST00000210338 280 ntBASIC1.21□□□□□ -2.22
HttP42859 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.2□□□□□ -2.22
HttP42859 Gm23813-201ENSMUST00000175153 77 ntBASIC1.2□□□□□ -2.22
HttP42859 Olfr1193-201ENSMUST00000081697 957 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm13676-201ENSMUST00000122185 591 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm23470-201ENSMUST00000157129 120 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm23702-201ENSMUST00000158840 130 ntBASIC1.2□□□□□ -2.22
HttP42859 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.2□□□□□ -2.22
HttP42859 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HttP42859 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
HttP42859 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
HttP42859 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm24690-201ENSMUST00000157759 97 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm20386-201ENSMUST00000174010 132 ntBASIC1.2□□□□□ -2.22
HttP42859 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm38332-201ENSMUST00000194189 147 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm36954-201ENSMUST00000195362 363 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC1.2□□□□□ -2.22
HttP42859 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.2□□□□□ -2.22
HttP42859 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HttP42859 Gm22423-201ENSMUST00000082861 184 ntBASIC1.2□□□□□ -2.22
HttP42859 Mir30d-201ENSMUST00000083503 82 ntBASIC1.2□□□□□ -2.22
HttP42859 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.19□□□□□ -2.22
HttP42859 Gm23321-201ENSMUST00000104465 126 ntBASIC1.19□□□□□ -2.22
HttP42859 Gm22583-201ENSMUST00000178031 107 ntBASIC1.19□□□□□ -2.22
HttP42859 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.19□□□□□ -2.22
HttP42859 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HttP42859 Gm25992-201ENSMUST00000102437 109 ntBASIC1.19□□□□□ -2.22
HttP42859 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.19□□□□□ -2.22
HttP42859 Gm13868-201ENSMUST00000122411 294 ntBASIC1.19□□□□□ -2.22
HttP42859 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.19□□□□□ -2.22
HttP42859 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC1.19□□□□□ -2.22
HttP42859 AC161572.1-201ENSMUST00000227486 640 ntBASIC1.19□□□□□ -2.22
HttP42859 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC1.18□□□□□ -2.22
HttP42859 Gm24793-201ENSMUST00000104289 132 ntBASIC1.18□□□□□ -2.22
HttP42859 Gm14879-201ENSMUST00000117308 507 ntBASIC1.18□□□□□ -2.22
HttP42859 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
HttP42859 Gm23752-201ENSMUST00000157584 115 ntBASIC1.18□□□□□ -2.22
HttP42859 Gm27980-201ENSMUST00000184094 169 ntBASIC1.18□□□□□ -2.22
HttP42859 Gm43954-201ENSMUST00000204634 544 ntBASIC1.18□□□□□ -2.22
HttP42859 Gm3690-201ENSMUST00000211341 262 ntBASIC1.18□□□□□ -2.22
HttP42859 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.18□□□□□ -2.22
HttP42859 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms